Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01959 ATGAATTTTAATCACTCTTGTGGTTTCTCTTTAACCAAACAAACTACAAAAACAACAGCTTCTTTTTTCCTTAGAAATTCTCATGTTTTTCTCTCCAAAAACACTTCACCTTTGTTTCTTAGAGAGTTTCTTCATGTCAAAGCTTTTCCACTTTCACCAAACATAACAAAAAGTTTGAGAAACTGTAAACTCACACACCCTTTTGCTAGTTTATCATCTTTTGCAGAAGCAGAAGGAGAAGAAGGTTCAAAAGAAGAAATTAACCATAATGCAACAAAAAATGGAGAGAAAGAGAATAATAGTGATGAAGTATCAGGAATGGCAAAAGCATTTAACATATCATCAAGAACAGCTTCTGCTATAACAATATGTATAGCAATGGCTGCACTTGTTTTTCCATTGTTTATGACATCTTTAGGACAAGGTTTAACATTGAAGACAAAAGTGTTATCATATGGAACACTTTTGTTTGGATTCTATATGGCTTGGAACATTGGTGCTAATGATGTTGCAAATGCAATGGGTACTTCAGTTGGATCTGGTGCATTGACACTTAGACAAGCTGTTTTGACAGCTGCAGTGTTGGAATTTTCAGGGGCATTGTTGATGGGAACTCATGTTACAAGCACAATGCAGAAAGGAATTCTTGTTGCTAATGTTTTTCAAGGGAAGGATTCTTTGCTTTTTGCAGGGTTGCTTTCTTCACTTGCTGCTGCTGGTACTTGGTTACAGTTTGCATCATATTATGGTTGGCCAGTATCTACTACACATTGTATAGTGGGAGCAATGGTAGGGTTTGGCCTAGTGTATGGAGGTGCTGGTGCTGTTTTCTGGGGTTCACTGGCTAGAGTGATTTCTTCGTGGATTTTCTCGCCTCTATTGGGAGCAGCAGTCTCATTTCTCGTCTACAAATGCATCCGAAGGTTTGTATACAGTGCAAGTAACCCAGGACAAGCAGCTGCTGCAGCAGCACCAATTGCTGTATTTCTCGGTGTAACCGGAATTTCATTTTCTGCATTCCCTCTTAGCAAGAGCTTTCCTATAGCTCTAAGCCAGGCATTAGCCTGTGGAACCGTCGGCGCTTTCCTGGTTAACAGAACTATCAGAAAACAACTCGGACATCTTCTAGATAAGTCAAATACTCCACAATCTGAGCCAAAAGATGATACTTCCAATCAAAACATAGGCTTCTTCTCTGATATTATAGGTCCAAAGGGTGCTCAACTTGAAATAGTTTACGGAGTTTTCGGTTACATGCAGGTTTTATCAGCATGTTTCATGTCATTTGCTCACGGCGGAAACGATGTTTCCAATGCCATAGGTCCATTGGCGGCTGCTCTAGCTATTCTACAAGGTGCTGCAAAAGGAGCTGAGATAGTTATTCCGATCGATGTTCTAGCATGGGGTGGATTTGGAATTGTTGCAGGGCTAATGATGTGGGGTTATAGAGTGATAGCTACAATTGGAAAGAAAATAACAGAACTTACACCAACGAGAGGATTTGCAGCCGAGTTTGCGGCTGCTTCAGTGGTTTTGTTTGCTTCGAAGCTAGGACTACCGATATCAGCAACGCATACACTAGTTGGTGCAGTAATGGGAGTTGGATTCGCGAGGGGACTTAACAGTGTTAGATCAGAAACTGTGAAGGAGATTTGCGCTTCATGGGCAGTTACTATACCGGTTGGCGCTACCTTATCAGTGATTTACACATGGATTTTGACGAAGCTTTTGGCTTATGTTTTATGA 1746 0.4072 MNFNHSCGFSLTKQTTKTTASFFLRNSHVFLSKNTSPLFLREFLHVKAFPLSPNITKSLRNCKLTHPFASLSSFAEAEGEEGSKEEINHNATKNGEKENNSDEVSGMAKAFNISSRTASAITICIAMAALVFPLFMTSLGQGLTLKTKVLSYGTLLFGFYMAWNIGANDVANAMGTSVGSGALTLRQAVLTAAVLEFSGALLMGTHVTSTMQKGILVANVFQGKDSLLFAGLLSSLAAAGTWLQFASYYGWPVSTTHCIVGAMVGFGLVYGGAGAVFWGSLARVISSWIFSPLLGAAVSFLVYKCIRRFVYSASNPGQAAAAAAPIAVFLGVTGISFSAFPLSKSFPIALSQALACGTVGAFLVNRTIRKQLGHLLDKSNTPQSEPKDDTSNQNIGFFSDIIGPKGAQLEIVYGVFGYMQVLSACFMSFAHGGNDVSNAIGPLAAALAILQGAAKGAEIVIPIDVLAWGGFGIVAGLMMWGYRVIATIGKKITELTPTRGFAAEFAAASVVLFASKLGLPISATHTLVGAVMGVGFARGLNSVRSETVKEICASWAVTIPVGATLSVIYTWILTKLLAYVL 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01959 581 PANTHER PHOSPHATE TRANSPORTER 147 576 IPR001204 GO:0005315|GO:0006817|GO:0016020
Trre16g01959 581 Pfam Phosphate transporter family 165 566 IPR001204 GO:0005315|GO:0006817|GO:0016020
Trre16g01959 581 MobiDBLite consensus disorder prediction 80 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01959 Trre-Chr16 15711166 15715256 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01959 21 581 Inorganic Solute Cotransporters AT3G26570 73.675 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01959 K14640 - gmx:100787349 868.611