Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01929 ATGACATCCTCGCAAGGATTTTCAGACGGGGACGCCTATAATGAGATGGGATTGAATTCTTACACTTTTGGGATTGTTCCTTTTGTCTCAAGAAGGTCCTTAGGAGTTATATCAGGAATGACAGGAGGAGGAGGAAACGTTGGAGCAGTTATAACTCAACTAATATTCTTCAAAGGATCAAGATTTTCAAAAGAAAGAGGAATAACACTAATGGGTGCAATGATCATAATATGCACATTACCATTATTCTTAATCTATTTTCCACAATGGGGTGGCATGTTATTTGGTCCATCATCATCTAAAAATGTCTCAGAAGAAGATTATTACTTGTCTGAATGGAACTCAAAGGAAAGAGAAAAAGGGTCTCATCATGGTAGCTTGAAATTTGCTGATAATAGTAGAAGTGAAAGAGGTACAAAATTGAATATTTCAACTAGACCTTCTGAGGATACCACACCACCACCACAAAATGTTTGA 477 0.369 MTSSQGFSDGDAYNEMGLNSYTFGIVPFVSRRSLGVISGMTGGGGNVGAVITQLIFFKGSRFSKERGITLMGAMIIICTLPLFLIYFPQWGGMLFGPSSSKNVSEEDYYLSEWNSKEREKGSHHGSLKFADNSRSERGTKLNISTRPSEDTTPPPQNV 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01929 158 MobiDBLite consensus disorder prediction 115 158 - -
Trre16g01929 158 MobiDBLite consensus disorder prediction 136 158 - -
Trre16g01929 158 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 20 140 IPR044772 GO:0015112
Trre16g01929 158 MobiDBLite consensus disorder prediction 115 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01929 Trre-Chr16 15460685 15466126 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01929 22 138 Inorganic Solute Cotransporters AT1G12940 72.650 3.80e-55 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01929 K02575 - gmx:100787888 219.164