Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01909 ATGCCATCTCAGACTCTTCCCATAACCAATCTTCAATTACCAAACCTTCTTTCATCTTCTTCTACAACTACAATGTTGCTTAAAGATAGCAACAATGTTGATGATGATGATGATAATGATCCATCAAAGACTCTCTTAATCTCTTCTTCATTCAACAACAACAAGATCATGTCCATTAAGCCTCTTCTATCAAGATCTTCAAGCTTCAACTCAATTGGTGGTGCTGGTGGTGTTGGTGTTAATTCTTTTTATCAGAAAAGACGTAGACGTGTTGCTAGTGAAGATTCATTGTCTTTTGTTTCTAATGGAACTTCTTCTTCTAATAGATCTTCTTCTTCCTTTGGTCGTGATGTTAGACATGTTGCTTCTGAAACTTATCTTATAACTCGTCTTGGATTGAAGATGTTGTCATATCTTGGGGTAGGCTATAAATGGATCACAAAATTTCTTGCTCTTGGTTGTTATGCTTTATTGCTTTTACCAGGCTTTATTCAAGTTGGATATCGTTATTTTTTCTCTAGTCAGATACGCAGAAGTGTAGTTTATGGAGATAAACCACGAAATAGGCTTGACTTGTTTTTGCCTAGAAATAGTGACGGCCCAAAACCAGTTGTTGCTTTCATTACTGGCGGAGCCTGGATTATTGGTTACAAAGCATGGGGTTCTCTTTTAGGTCAACAGCTCTCAGAAAGAGATATCATTGTGGCATGCATAGATTACAGAAATTTTCCTCAGGCAACCATCAGTGATATGATAGAAGATGCTTCGCAAGGCATCTCATTTGTATGCAACAACATCGCAGAATATGGAGGTGACCCTAACAGAATTTATCTAATGGGACAGTCAGCTGGAGCACATATTGCAGCGTGTACGATTGTGGAGCAGGCAATCAAAGAGGCTGGTGAAGGAGAGAGTACTTCTTGGAGTCTTTCCCAGATTAAGGCCTATTTTGGTTTATCTGGAGGGTATAATTTGTTCAACCTAGTAGATTACTTCCACAGTAGAGGCCTCTACCGTTCCATCTTTTTAAGCATAATGGAAGGGGAGGAATCACTACGTCGGTTTTCTCCTGAAGTAATGGTTCAAGATCCAAACATTGGAAATGCTGTTTCTCTACTACCTAATATGGTTCTTTTTCATGGCACCGGAGATTATTCCATACCGTCAGATCAAAGTACATCATTTGCCGAGACTCTTAAAAGAGCTGGAGTCAAAGCTGAAGCAATTTTATATGAAGGGAAGACTCATACAGATGTGTTTCTACAGGATCCTATGAGGGGTGGAAACGACGACATGTTTGATGATTTAGTAGCATATATTCATGCTGGCGATGCCGAGGCCCTTTCTAGAGATGCAACAGCTCCTCCACGGAGACGCCTTGTACCCGAATTCATGTTAAAATTGGCTCATGCTGTTAGTCCTTTCTAG 1428 0.3992 MPSQTLPITNLQLPNLLSSSSTTTMLLKDSNNVDDDDDNDPSKTLLISSSFNNNKIMSIKPLLSRSSSFNSIGGAGGVGVNSFYQKRRRRVASEDSLSFVSNGTSSSNRSSSSFGRDVRHVASETYLITRLGLKMLSYLGVGYKWITKFLALGCYALLLLPGFIQVGYRYFFSSQIRRSVVYGDKPRNRLDLFLPRNSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQATISDMIEDASQGISFVCNNIAEYGGDPNRIYLMGQSAGAHIAACTIVEQAIKEAGEGESTSWSLSQIKAYFGLSGGYNLFNLVDYFHSRGLYRSIFLSIMEGEESLRRFSPEVMVQDPNIGNAVSLLPNMVLFHGTGDYSIPSDQSTSFAETLKRAGVKAEAILYEGKTHTDVFLQDPMRGGNDDMFDDLVAYIHAGDAEALSRDATAPPRRRLVPEFMLKLAHAVSPF 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01909 475 Gene3D alpha/beta hydrolase 172 425 IPR029058 -
Trre16g01909 475 FunFam Isoprenylcysteine alpha-carbonyl methylesterase ICME 172 424 - -
Trre16g01909 475 Pfam BD-FAE 190 399 - -
Trre16g01909 475 SUPERFAMILY alpha/beta-Hydrolases 173 445 IPR029058 -
Trre16g01909 475 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 106 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01909 Trre-Chr16 15214609 15219390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01909 1 475 Carbohydrate Esterase AT1G26120 66.189 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01909 K15889 - gmx:100790850 690.263