Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01875 ATGAGTTTGATTATGAGCTACTGCACCAGTAACACTCTTCGCCTTCAATCTTGCACAATCCTAAACTCCAATCTTCACCAACATGGCAGGCATATTGTTCCCACCAATGCGCTCAAAAAACCTACTGAACATGAAATTTCTCTTCAGTCAAAGTTGAAGATTAATAGCAACAGTATTATGACATTCATTGGTGGAATCACAGCGGCACAATTGGTTGCTCCAGCCACTGCAAAAGCTGAAATGGCTGCTTCTATTTTTACTTTGGCTGATGGCGGTCTCGGTGACTGGTTTGGAGGCATTCTATTTTCAGCGGGACAGCAGGCCAATGAAGCAGTTCTGGACCAACTATCGTCCCTCAGTTTCACTAGTTTGGCTGTAATTTATGGGGCAGGACTTGTAACCAGCCTTTCTCCCTGTACACTTAGCGTGTTACCACTGACTCTCGGTTATATTGGGGCATTTGGCTCTGGTAAAAGCAGAGGACATGTCATTGGAGATTCCATTGCATTTTCCTTGGGTCTCGCAACCACATTAGCACTACTGGGTGTGGGAGCATCATTTGCAGGAAAGGCTTATGGACAGATTGGCCAAGGCTTACCTTTGGCTGCTTCTGGTTTGGCTGTAATTATGGGTCTGAACCTTCTTGAGATAATTGAATTAACGCTCCCCTCATTCTTCGAAAGTTTTGATCCACGTTCAGTGGCTGCCAATTTTCCATCAAGTGTGCAAGCATACCTTGCTGGGCTTACATTTGCATTAGCTGCCTCACCCTGCAGTACACCTGTTCTTGCTACTCTTCTTGGATATGTCGCCGCATCTAAGAATCCAGTGATCAGAGGCAGCTTGCTTTTGACATACACAACAGGTTACATTTCTCCATTACTTTTGGCTGCATCTTTTGCTGGAGCGTTACAGAGCTTGCTTTCATTTCGCAAGTACTCAGCATGGATCAATCCTATAAGCGGAGCAATGTTGTTAGGAGGCGGTGTATATACCTTCTTAGATAGGCTTTTCCCAGCCACAACAATGGCAATGTAG 1038 0.4499 MSLIMSYCTSNTLRLQSCTILNSNLHQHGRHIVPTNALKKPTEHEISLQSKLKINSNSIMTFIGGITAAQLVAPATAKAEMAASIFTLADGGLGDWFGGILFSAGQQANEAVLDQLSSLSFTSLAVIYGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRGHVIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELTLPSFFESFDPRSVAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKNPVIRGSLLLTYTTGYISPLLLAASFAGALQSLLSFRKYSAWINPISGAMLLGGGVYTFLDRLFPATTMAM 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01875 345 Pfam Cytochrome C biogenesis protein transmembrane region 128 334 IPR003834 GO:0016020|GO:0017004
Trre16g01875 345 PANTHER CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATED 118 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01875 Trre-Chr16 14867294 14871281 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01875 27 345 Chloroplast and Mitochondria Gene Families AT5G54290 71.171 1.72e-142 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01875 - - mtr:25502555 561.607