Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01849 ATGGATAGTTCAAATTCAATTACCATTCAATGGCTAAACACTCTTTTACTATTTGCACTATTTGCACTGCTGTTACTTAAGACACAAGGACAGTTTGTTCCAATAACTCGGCTCGAAAGCGCGGTATCAAAAGGAGCTGTGTGTTTGGATGGAAGTCCTCCAGCTTATCATTTTCATGAAGGACATGAAGAAGGAGTTAACAACTGGATTGTTCACATTGAGGGAGGTGGATGGTGTCACAATGTCACATACTGTCTTTATCGTAAGGACAGTCGATTAGGTTCGTCGAATCAAATGGAAGAGCAAACTTACTTTTCTGGATATTTAAGTGATAACCAACAATATAATCCAGATTTCTACAATTGGAATAGAGTCAAGATTAGGTACTGTGATGGATCATCATTTACCGGTGATATCGAAGAAGTTGATCCAGAGACAAATTTGCACTACAGAGGACAAAGGATTTTTAATGCTGTAATGGAAGAGTTACTAGCAAAAGGAATGGATCATGCTGAAAATGCTATAATTTCTGGATGTTCTGCTGGAGGATTAGCTGCAATTTTACACTGTGATGGATTTAGAGAACTATTACCTAATGGAACTAAAGTTAAATGTGTCTCAGATGCTGGTTATTTTGTTAATGTAAAGGATATCTCAGGAGATTATTATATTGAAGATTATTATAGTGAAGTTGTTGAAACACATGGATCGGAGAAGAATTTGCCACAATCCTGCACTTCAAAACGCAGTCCAGGACTTTGTTTTTTTCCTCAATATATGGCATCAAGTATCAGAACACCACTCTTCATTGTAAATGCAGCATATGACTCATGGCAGATTAAGAACATTTTGGCACCTGGTGCCGCTGATCCGAATGGTCAATGGAGTAGCTGCAAGACTAATCTAAACAACTGCTCACCTGAACAACTAAATATAATGCAAGACTATAGGACACAATTCTTGAAGGCATTGAGTCCTATAAGCAAGTCTACATCTAATGGAATGTTCATAGACTCTTGCTATGTCCACTGCCAAACAGAACCACAAGATACATGGTTTACAAGGGACTCTCCAATGGTTGGCAATAAAACAGTTGCAAAAGCAGTAGGAGACTGGTTTTATGAAAGAGATCCTTCTCGTGAGATAGATTGCACTTACCCTTGTAACCCTACTTGTCAGAACCTTGTTTTGGATGTTGCAGCCTACCCGGGAATACACTAG 1221 0.3857 MDSSNSITIQWLNTLLLFALFALLLLKTQGQFVPITRLESAVSKGAVCLDGSPPAYHFHEGHEEGVNNWIVHIEGGGWCHNVTYCLYRKDSRLGSSNQMEEQTYFSGYLSDNQQYNPDFYNWNRVKIRYCDGSSFTGDIEEVDPETNLHYRGQRIFNAVMEELLAKGMDHAENAIISGCSAGGLAAILHCDGFRELLPNGTKVKCVSDAGYFVNVKDISGDYYIEDYYSEVVETHGSEKNLPQSCTSKRSPGLCFFPQYMASSIRTPLFIVNAAYDSWQIKNILAPGAADPNGQWSSCKTNLNNCSPEQLNIMQDYRTQFLKALSPISKSTSNGMFIDSCYVHCQTEPQDTWFTRDSPMVGNKTVAKAVGDWFYERDPSREIDCTYPCNPTCQNLVLDVAAYPGIH 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01849 406 Pfam Pectinacetylesterase 27 377 IPR004963 GO:0016787
Trre16g01849 406 PANTHER NOTUM-RELATED 21 394 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01849 Trre-Chr16 14664089 14666892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01849 12 405 Carbohydrate Esterase AT4G19420 55.711 0.0 525