Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01841 ATGACACAAGAAGCCAAATCCAAACCATTTGATCTCGCCAAAGATGTTTCCCCGCAGATTTTTTCATTGGTCCATCAAACTGTCCACAAATATGGCAAAAATTCATTTTTATGGGAAGGTAGAACACCAAAGGTGATTATCACGGAGCCAGAACAAATCAAACAAGTGTTTAATAAGATGCAAGATTTCACCAAACCAAAGTTCAGTTCCATTGCTAGGTTTTTTGCTGTTGGTCTTGCAAGTTATGAGGGCGAGCAATGGGCTAAACATCGAAAGATTATAAACCCTGCATTTCACATTGATAAATTGAAAAATATGTTACCGGTATTTATTCAAAGTAGCCAAGATATGATTAGCAAATGGAAGGAAATGTTGACAATAGATGGATCATGTGAGATTGATGTCCAGCCTTTCATTCAAAACTTGACTTGTGATGTAATCTCAAGAACAGCATTTGGAAGCAATTATGTACAAGGGTCAAAAATATTTGAACTTCTAAGAATGCAGGGGCATATTTTAATTAATACAGCGCATACACGCACTCCAATAAATTGGTTTGGACCTACAAATTCCTACAAGAGGATGAAGGAAATGGATAGGGAGATGTATGATTTAGTAGAGGGTATCATTAAAAAACGAGAAACTGAAATGAAGAATGGAAAAGCAAATAATGATGATTTATTAGGCATACTTATAGAATCAAATAACCTTGAAATTCAAGGACATGAAAAAAGTAAGACAGCAGGAATGTCTTATGATGAACTAGTTAAGGAGTGCAAGCAATTCTACATTGCAGGACAAGAGACTACTTCATCTTTATTAGTTTGGACAATGGTGTTATTGGCTAGGTATCCTGAATGGCAAGAACTTGCAAGGCAAGAAGTTTTACAAGTTTTTGGAAACCAAACTCCAAATCATAATGGGTTAAATCAACTTAAAATCATGACCATGATTTTATACGAGGTTCTGAGATTATATCCACCAACGGTTTACTTAGTTCGAGCTACTCAAAAAAATTTAAAACTTCAAAACCTATCATTACCTGCAGGAGTAAATATTTCCATACCAATACTTTTGGTTCACCATGATTGTGATATTTGGGGTGATGATGCAAAAGAGTTTAAACCTGAAAGGTTCTCTGAAGGAGTTGCAAAGGCCACAAAAGGTCAAGTTTCATTTTTTCCCTTTGGATGGGGTCCTAGGATATGCATTGGTCAAAACTTTGCCTTATTGGAAGCCAAAGTAGTATTGTCACTACTTCTACAAAATTTCTCATTTGAGCTTTCTGCAGATTATAAGCATGCTCCCACTGCTATTCTTTCTCTGCAACCAAAGCATGGGGCCTTGATCCGTCTCCATAAATTGTAA 1368 0.3611 MTQEAKSKPFDLAKDVSPQIFSLVHQTVHKYGKNSFLWEGRTPKVIITEPEQIKQVFNKMQDFTKPKFSSIARFFAVGLASYEGEQWAKHRKIINPAFHIDKLKNMLPVFIQSSQDMISKWKEMLTIDGSCEIDVQPFIQNLTCDVISRTAFGSNYVQGSKIFELLRMQGHILINTAHTRTPINWFGPTNSYKRMKEMDREMYDLVEGIIKKRETEMKNGKANNDDLLGILIESNNLEIQGHEKSKTAGMSYDELVKECKQFYIAGQETTSSLLVWTMVLLARYPEWQELARQEVLQVFGNQTPNHNGLNQLKIMTMILYEVLRLYPPTVYLVRATQKNLKLQNLSLPAGVNISIPILLVHHDCDIWGDDAKEFKPERFSEGVAKATKGQVSFFPFGWGPRICIGQNFALLEAKVVLSLLLQNFSFELSADYKHAPTAILSLQPKHGALIRLHKL 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01841 455 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 396 405 IPR017972 GO:0005506|GO:0016705
Trre16g01841 455 CDD CYP72 21 448 - -
Trre16g01841 455 PRINTS E-class P450 group I signature 274 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01841 455 PRINTS E-class P450 group I signature 403 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01841 455 PRINTS E-class P450 group I signature 393 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01841 455 PRINTS E-class P450 group I signature 254 271 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01841 455 PRINTS E-class P450 group I signature 28 47 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01841 455 PRINTS E-class P450 group I signature 142 160 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01841 455 PANTHER CYTOCHROME P450 FAMILY MEMBER 14 448 - -
Trre16g01841 455 Gene3D Cytochrome P450 9 455 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01841 455 SUPERFAMILY Cytochrome P450 18 453 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01841 455 PRINTS P450 superfamily signature 265 282 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01841 455 PRINTS P450 superfamily signature 317 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01841 455 PRINTS P450 superfamily signature 403 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01841 455 PRINTS P450 superfamily signature 394 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01841 455 Pfam Cytochrome P450 18 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01841 Trre-Chr16 14623432 14625893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01841 1 455 Cytochrome P450 AT3G14690 53.173 7.93e-178 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01841 - K17873 ag:BAL45207 648.662