Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01835 ATGTTGAAGGTGTGTGTATATATTAAGCTAAGCATCTTCTGCGGTTCTTTTGCTGCTGCTGGGAATTCCTCCTTATGGTTTTTGAGGGAGCATCAATCAGAGTGTGCCGATTATGGTGTTGATGCATATTCTGCTGCTTGTCTCAAGTCTAGCCCCTATGCAGTTCTGTGTGCAAGACCTGGTGGCTTCCCCAGTAGTCAGGTCATTTTACCTCTTGCTCCTACGATCGAGCTTGAGGAGTTCCTGGAGGTAGTTCGTATAGAAGGTCATGCATTTTCCCTAGAAGATGTTGCGTTGGCATGTGATATGTATCTTTTGCAGGACGGTCCAACTTCAAGGACATTGGCTGCTATGGCTCTTCAGTATTTGCGTAGTTTTGTGGGATCAGTTCAGAGGGTTTCCTTGCCATGGAAATTGCTCACTCTCGACCAGATGCAATTATGTGATGTTCTGTTAAAACAAATGCATCTCCAAAATTCACCTTTGCAAACCAAGGTGGACTAG 504 0.4484 MLKVCVYIKLSIFCGSFAAAGNSSLWFLREHQSECADYGVDAYSAACLKSSPYAVLCARPGGFPSSQVILPLAPTIELEEFLEVVRIEGHAFSLEDVALACDMYLLQDGPTSRTLAAMALQYLRSFVGSVQRVSLPWKLLTLDQMQLCDVLLKQMHLQNSPLQTKVD 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01835 167 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 25 107 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01835 Trre-Chr16 14594086 14596034 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01835 27 107 Homeobox Transcription Factor Family AT2G34710 75.309 1.88e-35 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01835 K09338 - fve:101309330 142.895