Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01813 ATGGCACAAAGTTCTGTCCTTGATTACTTGCTAATCTTCATATTTTATTGGTTCAGTTTGTTTTGTGTGAATGCAACTACATACAGAGAACTCCTACAAATCGGTCAATCAATCCGAATCTCAGACACCGTTGTTTCTAACGGTGGAAGCTACGAACTCGGGTTTTTCACCAGAAGCAAAGACAACTCCACCAAGTACTACATTGGTATATGGTTCAAAAAAGTTCCAAATGACAAGATTGTGTGGGTTGCAAATAGAGATTATGCATTTCAAACTACCTCGCCGGAACTTACTATTAACCCTGCTGATGGTAACATTGTCGTCGTAGACGGACAGATTACATATCATGTGACAAACTTTACAGACAACAACAATAATAGTACTTACATGGCTCTCTTCGATTCTGGAAACCTGCGATTGCAGAACAATTCGAACCACGCGATTCTTTGGGATAGTTTTGGTAATCCTACAGATACCATTCTAGCTGGAAATGAACTGAAGTTAGGAAACAGCTGGTCAATCAATTCATGGGCAAGTTCAGATGATCCTTCTCCGGGGCAATTTACTCTCAAGTATGATGCTGTTTTTAATAGACTAACTATTAACAGTCGTTCGATTCACCGAGCAGGTTTGGAATTGAACAAAAAAGGCTATTATAGTCTACTAGATGATAGCAATTCCCGGTTAGTATTGGAAGTGTCCGGGGATCTTAATTACCAGTATTGGTCGGAGGAAAATATGCGTTGGGATTCTGTACAATCTTATTCTATGTGTCGAAACAATGTTACTTGTGGAGTTTTTTCGCTTTGTGATCCGCAAGCTCTTGATCCTTGTCACTGCATGAAAGGTTTTGAACCGGTGGATGGATCCTTACGCTACGATGAGTTTACACAGAGCAATGGGAATGGAAGAAGGTATGCTGGTTGTGTGAGGAAGACGGAGTTGTTGTGCCATAACAAAAGCAGTAATACTAATGATCAATTCTTACGGTTTGATAAAGTGGAATTACCTCCAGATGAAATGAGGCTGAAGATGGATTCAACAGAAAAATGTGAAAGCACTTGTGTAAAAAATTGCTCTTGTATTGCTTATGCTTACTATTTTAATAATTACTGCATGTTGTGGTATGATAATATATTGAGTTTGAAGAAAATCTCAAGTGATATTGATGATAATAATCATCTTGCTTTTTATCTCAGACTTGCTGCTTCAGAATTTGTTACAACCTATTCTAATACAACAAAAGTAGTTGGCAAACACAGAAGCGGGAAGAGAAATCTACTTCTAATTGTTATACCAATCTCAATTCTAATGATGCTTTTACTAATGTGCCTACTCTTTTTCTGGACTAAAACTCAAAGAAAGAAAGGGGATGACTTGCTGCATTTTGAAGTAGGCATGAACATGCAAGTTAAAAAAGAAGACAAGGATGCAAAACTTAAGAAGAAGGAAGTAAAATTGCCATTATTCAGTTTTGTGAGCGTTTCAGCAGCTACTAATAACTTTTCAGATGTAAATAAGCTTGGGGAGGGTGGCTTTGGACCTGTTTACAAGGGTAAATTATTGAATGGAGATGAAGTTGCTGTAAAACGATTATCTCGAAGATCAGGTCAAGGATGGGAGGAGTTGAGAAATGAAGCCACATTGATTGCAGAACTACAACACAATAATCTTGTTAGACTTTTGGGCTGCTGCATCGAGCGAGACGAAAAGATGCTTATTTATGAGTTTATGCCTAATAAAAGCTTGGATTGTTTTCTATTTGATGCCACAAAAAGAAGTAACCTAGATTGGAGAACGCGTGTTCGGATAATTGAAGGAATTGCTCAAGGACTCCTTTACCTTCATCAATATTCTCGATTTCGAATCATTCACCGAGATTTAAAAGCTAGTAACATATTGTTAGACATCAACATGAATCCTAAAATATCAGATTTTGGTATGGCCAGAATATTTAGTGCAAATGAAGTTCAAGCAAATACAAATCGAATAGTTGGAACTTATGGTTACATGTCTCCTGAATATGCAATGGAAGGCCTTTTCTCGATTAAATCCGACGTGTTTAGCTTTGGGGTCCTTTTGTTGGAGATTGTAAGTGGCAAGAAGAATACCAGATTCTTTCAAACAAACTCCTTGAATCTTCTTGGATATGCTTGGGATCTATGGATAAACAATTCTGGAATAAACTTGATGGATTCAACATTGAATGATACTTACAGCAAGCATTTAGTGCTAAGATACATAAACATAGGACTTCTGTGTGTACAACAAAGTTCAGCAGATAGGCCTACAATGTCTGATGTAATATCAATGATTGGCAATGACACTGTACCCCTTCCTTATCCTAAGTCACCAGCATTTCAAAATGTGAGAGGTGTTGATAATTCAAGACTCTCTAGCATCATAGATGAAACCTTTTCTTTGAATGTTATGACAGATTCAATCATGGAACCAAGATGA 2460 0.3736 MAQSSVLDYLLIFIFYWFSLFCVNATTYRELLQIGQSIRISDTVVSNGGSYELGFFTRSKDNSTKYYIGIWFKKVPNDKIVWVANRDYAFQTTSPELTINPADGNIVVVDGQITYHVTNFTDNNNNSTYMALFDSGNLRLQNNSNHAILWDSFGNPTDTILAGNELKLGNSWSINSWASSDDPSPGQFTLKYDAVFNRLTINSRSIHRAGLELNKKGYYSLLDDSNSRLVLEVSGDLNYQYWSEENMRWDSVQSYSMCRNNVTCGVFSLCDPQALDPCHCMKGFEPVDGSLRYDEFTQSNGNGRRYAGCVRKTELLCHNKSSNTNDQFLRFDKVELPPDEMRLKMDSTEKCESTCVKNCSCIAYAYYFNNYCMLWYDNILSLKKISSDIDDNNHLAFYLRLAASEFVTTYSNTTKVVGKHRSGKRNLLLIVIPISILMMLLLMCLLFFWTKTQRKKGDDLLHFEVGMNMQVKKEDKDAKLKKKEVKLPLFSFVSVSAATNNFSDVNKLGEGGFGPVYKGKLLNGDEVAVKRLSRRSGQGWEELRNEATLIAELQHNNLVRLLGCCIERDEKMLIYEFMPNKSLDCFLFDATKRSNLDWRTRVRIIEGIAQGLLYLHQYSRFRIIHRDLKASNILLDINMNPKISDFGMARIFSANEVQANTNRIVGTYGYMSPEYAMEGLFSIKSDVFSFGVLLLEIVSGKKNTRFFQTNSLNLLGYAWDLWINNSGINLMDSTLNDTYSKHLVLRYINIGLLCVQQSSADRPTMSDVISMIGNDTVPLPYPKSPAFQNVRGVDNSRLSSIIDETFSLNVMTDSIMEPR 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01813 819 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 125 788 - -
Trre16g01813 819 SMART ntp_6 323 393 IPR003609 -
Trre16g01813 819 SUPERFAMILY Protein kinase-like (PK-like) 486 791 IPR011009 -
Trre16g01813 819 ProSiteProfiles Protein kinase domain profile. 502 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g01813 819 CDD PAN_AP_plant 313 402 - -
Trre16g01813 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Trre16g01813 819 Pfam Protein tyrosine and serine/threonine kinase 506 771 IPR001245 GO:0004672|GO:0006468
Trre16g01813 819 ProSiteProfiles PAN/Apple domain profile. 317 402 IPR003609 -
Trre16g01813 819 Pfam D-mannose binding lectin 80 170 IPR001480 -
Trre16g01813 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 578 780 - -
Trre16g01813 819 Gene3D - 24 154 IPR036426 -
Trre16g01813 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 182 IPR036426 -
Trre16g01813 819 Pfam S-locus glycoprotein domain 217 286 IPR000858 GO:0048544
Trre16g01813 819 Gene3D Phosphorylase Kinase; domain 1 475 577 - -
Trre16g01813 819 FunFam Uncharacterized protein 478 577 - -
Trre16g01813 819 SMART blect_4 35 156 IPR001480 -
Trre16g01813 819 SMART serkin_6 502 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g01813 819 CDD STKc_IRAK 508 772 - -
Trre16g01813 819 Gene3D Transferase(Phosphotransferase) domain 1 578 777 - -
Trre16g01813 819 PIRSF SRK 2 819 IPR024171 GO:0004674
Trre16g01813 819 ProSiteProfiles Bulb-type lectin domain profile. 29 153 IPR001480 -
Trre16g01813 819 Pfam PAN-like domain 322 381 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01813 Trre-Chr16 14389734 14393570 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01813 417 797 Receptor kinase-like Gene Family AT4G05200 49.612 2.66e-124 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre16g01813 PK_Tyr_Ser-Thr 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01813 - - psat:127086248 982.63