Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01775 ATGTGCACATACATGCATTGTAAGATAGAGAAACAAATTGTGTTCATGATCATGTACTTATCATGGTTATTGTGTTGGAGTTGGAGTACTACTAAAGCACAAAAAGTTGATAGTTTGAAACCAGGTGATGAGTCATTTGTTCTACATTCTAAACAAGGCAAGTTTTATATAACTTTTGGCGTTTTCTTTGGTTATAACAAGCAAACATACTTGTATATTTCTAATACTTATGCTGAACATGATGTAGCTTGGTTCTATGATAGAAATTGTCCCATTAACTTAGATTCACCAGTTCTATCACTAGACAAGTTTGGTGTGCTCAAAATTGAATCCAAAACTAGTCGGAAATTACCAATAATCATTTACTCTTCACCACAACCAATTAACAACACTGTGGCCACTATTTTAGACACAGGTAACTTTGTACTTGAACAAATTCACCACAATGGAACAAAGAGTTTGTTGTGGCAGAGTTTCGATCACCCCATTTACACTTTGATCCCAACGATGAAATTAGGTGTTAACCGAAAAACAGGACATAATTGGTCACTAGTTTCGACGTTAACTAGTTTGGTCGTAAATTCGGGTGAATTTAGTCTTGAATGGGAACCAAAACAAGGCGAATTGAACATTAAGAAACGCGGCAAAGTATATTGGAAAAGCGGAAAACTTGGAAGAAATGGATTATTTGAAAACATTCCGGCTAATGTTCAACATATGTATCAGTACAATATTGTCTCTAACAAGGATGAAGATTCTTTCTCTTTAAAAGTTAAAGATCATCAGAATTATAAGAAGATTATAGGATGGGAACTAGATTCGACGGGGAAGTTAATGAGTGATGAAGGAGAAATTGGAAATGCAGATATGTGTTATGGATATAATATTGATGGAGGGTGCCAAAAATGGGAGGATATACCAACTTGTAGGGATCAAGGTGAAGTGTTTCAGGAAAAGAAAGGTACTCCCATTTTTGGCATTAATACAACAACAACAGTTGAAGATAATGCACAATATGGTTACAGTGATTGCAAGGCAATATGTTGGAGAAATTGTAATTGCACTGGATTTGAATTACTTTATAATAATGGGACTGCATGTTTATTCTATTCATGGAATTCAACTAAAAATGGTAACTTTAGTGATGATATTGGTAACTTTTATCTCTTGGTAATCCCCCCAATAAAGGAAGCTCCAAAGGTTGCTCACCATGGTAAAAAAAGGTGGATATGGATAAGTGCAGTAGTAGCAGCTGCTATACTAATAATATTGCCATTCATTGTATATCTAGCAATAAAGAAACAAAAATATGGGTTTAAAGATAATAAGAAAAGTAAAAGAAAGGAATCTGAGATGCAAGATTTGGCAGCTGCTAATGAATCCTATGATATCAAGGATCTTGAGGATGAATTCAAGGGTCATGATATAAAAGTTTTTAACTTTACATTAATTATGGAAGCAACTATGGACTTTTCCCTTGAAAACAAGTTAGGACAAGGAGGCTATGGACCAGTTTATAAGGGAATCTTGCCAACAGGGCAAGAAGTTGCTGTAAAAAGACTTTCAAAAACTTCAGGACAAGGAATTGTGGAGTTCAAAAATGAATTGGTACTTATATGTGAACTTCAACACACAAATCTTGTACAACTACTTGGTTGTTGCATTCATGAAGAAGAAAGGATTCTAGTTTATGAATATATGGCAAACAAAAGTTTGGATTTCTATCTATTTGATTCCACAAAAAAGAAATTCCTAGATTGGAAGAAGCGTTTCAACATTATAGAAGGAATTTCTCAAGGATTACTCTATCTTCATAAGTACTCAAGACTCAAAATCATTCACAGAGACTTGAAAGCTAGCAACATACTACTTGATGAGAATATGAACCCAAAAATTTCTGATTTTGGTATGGCAAGAATGTTCACACAGCAGGAATCCATAGTAAATACCAACAGGATTGTTGGGACATATGGATACATGTCTCCAGAGTATGCTATGGAAGGAATTTGTTCAACAAAATCTGATGTCTATAGCTTTGGAGTGTTACTACTTGAAATTGTTTGTGGAAGGAAAAACAATAGCTTCTATGATGTTGATCGTCCACTAAATCTCATAGGACATGCATGGGAGCTATGGAATGATGGTGAGTATCTACAATTAATTGATCCATCATTAAGTGACACGTTTGTTCCTGATGAAGTGCAAAGGTGCATTCATGTTGGTCTCTTATGTGTACAACAATATGCAAATGATCGACCAACAATGTCTGAAGTTATATCAATGTTAACAAACAAATATGAACTCACAACCTTACCAAGAAGACCTGCATTTTATGTTAGAAGAGAGATCTTTGAGGGGGAAACAACTTCTAAAATGCTAGACACTGACACTTATTCTATGACTGCAATTTCTACCTCATGTGAAGGAGAAGGGAACATATAA 2442 0.3473 MCTYMHCKIEKQIVFMIMYLSWLLCWSWSTTKAQKVDSLKPGDESFVLHSKQGKFYITFGVFFGYNKQTYLYISNTYAEHDVAWFYDRNCPINLDSPVLSLDKFGVLKIESKTSRKLPIIIYSSPQPINNTVATILDTGNFVLEQIHHNGTKSLLWQSFDHPIYTLIPTMKLGVNRKTGHNWSLVSTLTSLVVNSGEFSLEWEPKQGELNIKKRGKVYWKSGKLGRNGLFENIPANVQHMYQYNIVSNKDEDSFSLKVKDHQNYKKIIGWELDSTGKLMSDEGEIGNADMCYGYNIDGGCQKWEDIPTCRDQGEVFQEKKGTPIFGINTTTTVEDNAQYGYSDCKAICWRNCNCTGFELLYNNGTACLFYSWNSTKNGNFSDDIGNFYLLVIPPIKEAPKVAHHGKKRWIWISAVVAAAILIILPFIVYLAIKKQKYGFKDNKKSKRKESEMQDLAAANESYDIKDLEDEFKGHDIKVFNFTLIMEATMDFSLENKLGQGGYGPVYKGILPTGQEVAVKRLSKTSGQGIVEFKNELVLICELQHTNLVQLLGCCIHEEERILVYEYMANKSLDFYLFDSTKKKFLDWKKRFNIIEGISQGLLYLHKYSRLKIIHRDLKASNILLDENMNPKISDFGMARMFTQQESIVNTNRIVGTYGYMSPEYAMEGICSTKSDVYSFGVLLLEIVCGRKNNSFYDVDRPLNLIGHAWELWNDGEYLQLIDPSLSDTFVPDEVQRCIHVGLLCVQQYANDRPTMSEVISMLTNKYELTTLPRRPAFYVRREIFEGETTSKMLDTDTYSMTAISTSCEGEGNI 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01775 813 CDD STKc_IRAK 497 764 - -
Trre16g01775 813 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 567 770 - -
Trre16g01775 813 SUPERFAMILY Protein kinase-like (PK-like) 476 783 IPR011009 -
Trre16g01775 813 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Trre16g01775 813 Pfam D-mannose binding lectin 82 186 IPR001480 -
Trre16g01775 813 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 132 788 - -
Trre16g01775 813 Gene3D Phosphorylase Kinase; domain 1 440 566 - -
Trre16g01775 813 ProSiteProfiles Protein kinase domain profile. 491 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g01775 813 Gene3D Transferase(Phosphotransferase) domain 1 567 772 - -
Trre16g01775 813 PIRSF SRK 7 294 IPR024171 GO:0004674
Trre16g01775 813 PIRSF SRK 283 809 IPR024171 GO:0004674
Trre16g01775 813 SMART serkin_6 491 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g01775 813 ProSiteProfiles PAN/Apple domain profile. 309 393 IPR003609 -
Trre16g01775 813 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 456 566 - -
Trre16g01775 813 Pfam Protein tyrosine and serine/threonine kinase 492 762 IPR001245 GO:0004672|GO:0006468
Trre16g01775 813 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 187 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01775 Trre-Chr16 14148005 14152306 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01775 389 803 Receptor kinase-like Gene Family AT3G45860 47.608 7.03e-122 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre16g01775 PK_Tyr_Ser-Thr 1.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01775 - - mtr:11409308 1120.92