Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01773 ATGGCACTTAACAGTGAACAAGGGAAACCTCGTGTTTTACTTCTCTTCTTGTGGTTGTGGTGGTTGACTACTAGTACTTCTATCCATGTCAAAGCCGAAACAATTGATAGTTTTTTGAAGGTAGGAGATACACTGGGTCCCTTTTCGTCGTTGTGTTCTAAACAAGGTACATTTTGCATGAGTTTTGACCTAGGTCCTGAAAACATCCCCACTTATCTCCGCATATATGTCCCCCAAGAAAAAGAAGATTGGGTAGTGTGGGTTGCTAACAGAAACCAACCAGTTGAAAGGGATTCTGTAGTTTTATTACTAGACCACTCTGGTTTACTCAAAATTGAACCGAAAAATGGAGAACCAATAATACTTTACGCTTCACCTCAACCTTTTAACAATAGTACTATTGTAGCTACCTTGATGGATACAGGTAACTTTGTGTTACAAGATATTCAGATGAAGACTGTGTTGTGGCAAAGTTTTGATAATCCAACTGATAGTTTGCTTCCTGGGATGAAATTAGGTGTGAATCATAAAACTGGTGAAAAATGGTCACTGGTTTCAAGGCTTAGTGATTCTGTCCTAGCTCCTGGTCCATTCAGGCTTGAGTGGGAACCAATAAGTAAAGAATTGGTCATCAAGAATAGAGAAAAGGTTTATTGGAAAAGTGGAGAACTGATGAATAACAATAGATTTGAGTACATATCCGGTGAAAATTTTCAGTACAAAATTGTGTCTAATAAGGATGAAGAGTACTTCGCATACACAACTCGAAATAAAGATCTTACTATATGGACTTTATTAGAAACAGGACAACTTATAAACAGGATAGGAACTGACATAGCAAGGGCTGATTTGTGTAATGGGTATAACACTAATGGGGGGTGCCAAAAGTGGGGTGAGTCTGAGATATTACCTATTTGTAGGAATTCTGGTGATACGTTTGATAGCGAATCAGGTTACCCTAATTATAAATTGTTACACAATATAACAAATGCTAGTTATGGCATAAGTGATTGCCGAGCGAATTGCTGGAGTAACTGCAGCTGCTTTGGATACAAAACCTTTTATGATAATGGAACTGGTTGTGTCTTCTTGCTATCGACAAAAGGTCTTAACATTGCAAGCAATGGTGATTACTTATTTTACATTCTAGTAAAGAACGCCGATCACAAAGGTAAAAACAACAAGAAGTGGATATGGATTTGCGTTGGAATGGGGACTGCCCTACTCATTATTGGCCTTTCCATTCTGTTTCGAGCCTTAAGGAAACGAAAATATGTGCTTCGAGAGAAGGAAAGAATGAAAATGCAGATTGAGATTCAAGATCTTGAAGCTTCTAGGCAATACACTGATGACGATGATCTAGAAGGCGAATTAAGCAATGGAGATGACTTAAAATTGTTTAGCTATTCAACAATAATTGTTGCTACCAATGGCTTTTCATCAGAAAACAAGTTGGGACAGGGTGGCTTTGGACCTGTTTTTAAGGGAATTCTACCTTCAGGACAAGAAGTAGCTGTGAAGAAACTTTCAAAAACTTCTGGACAAGGAATTACTGAATTTAGAAATGAATTAACACTCATTTGTAAACTTCAGCATACAAATCTTGTTCAGCTAATCGGTCATTGCATTCATGAACAAGACCGGATGTTGATCTATGAGTATATGCCCAACAAAAGCTTGGACTTTTTTTTATTTGATGGCACTAGAAGAAAGTTGCTAGATTGGAACAAACGCTTTAGCATAATAGAAGGAATTGCTCAAGGATTACTATATCTTCACAAATACTCGAGACTCAGAATTATCCACAGAGATTTGAAGGCAGGTAATATTCTCCTCGATGAAAATATGAACCTCAAAATTTCTGATTTTGGTGTAGCAAGAATGTTCACAAAACAAGAAACCGAAGCAAATACCAATAGGATTGTTGGGACATATGGTTATATGTCTCCAGAGTATGCGATGGAAGGAGTTTTTTCTACAAAGTCTGATGTGTATAGTTTCGGAGTGTTGCTCCTTGAAATTATCAGCGGTGAAAAAAACAATAGTTTCTACTCTGACGACAGACCACTTAATCTAGTAGGACATGCATGGGAGCTATGGAAAGAAGGTGTGGTTCTTCAATTGGTGGATCCATTACTAAATGAGTCGTTTTCCGAGGATGAGGTGATAAGATGTGTTCATGCTGGTTTATTATGCGTAGAAGAAAATGCAGATGATCGCCCCACCATGTCCAATGTTATATCAATGTTAACAAACAAAATCAAAGCGGATGTTTTGCCTAAGAAACCAGCATACTATGGTGGAACAAGAGTCTTCGAGGAAGAAACGTTTGCCGAAGAATTGGGTATGGATTCCACATTTGATAACTCTACTTCACATGTACAATCAATATAG 2394 0.3776 MALNSEQGKPRVLLLFLWLWWLTTSTSIHVKAETIDSFLKVGDTLGPFSSLCSKQGTFCMSFDLGPENIPTYLRIYVPQEKEDWVVWVANRNQPVERDSVVLLLDHSGLLKIEPKNGEPIILYASPQPFNNSTIVATLMDTGNFVLQDIQMKTVLWQSFDNPTDSLLPGMKLGVNHKTGEKWSLVSRLSDSVLAPGPFRLEWEPISKELVIKNREKVYWKSGELMNNNRFEYISGENFQYKIVSNKDEEYFAYTTRNKDLTIWTLLETGQLINRIGTDIARADLCNGYNTNGGCQKWGESEILPICRNSGDTFDSESGYPNYKLLHNITNASYGISDCRANCWSNCSCFGYKTFYDNGTGCVFLLSTKGLNIASNGDYLFYILVKNADHKGKNNKKWIWICVGMGTALLIIGLSILFRALRKRKYVLREKERMKMQIEIQDLEASRQYTDDDDLEGELSNGDDLKLFSYSTIIVATNGFSSENKLGQGGFGPVFKGILPSGQEVAVKKLSKTSGQGITEFRNELTLICKLQHTNLVQLIGHCIHEQDRMLIYEYMPNKSLDFFLFDGTRRKLLDWNKRFSIIEGIAQGLLYLHKYSRLRIIHRDLKAGNILLDENMNLKISDFGVARMFTKQETEANTNRIVGTYGYMSPEYAMEGVFSTKSDVYSFGVLLLEIISGEKNNSFYSDDRPLNLVGHAWELWKEGVVLQLVDPLLNESFSEDEVIRCVHAGLLCVEENADDRPTMSNVISMLTNKIKADVLPKKPAYYGGTRVFEEETFAEELGMDSTFDNSTSHVQSI 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01773 797 ProSiteProfiles Bulb-type lectin domain profile. 36 159 IPR001480 -
Trre16g01773 797 SUPERFAMILY alpha-D-mannose-specific plant lectins 85 183 IPR036426 -
Trre16g01773 797 Gene3D - 31 159 IPR036426 -
Trre16g01773 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 600 612 IPR008271 GO:0004672|GO:0006468
Trre16g01773 797 ProSiteProfiles Protein kinase domain profile. 479 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g01773 797 Pfam D-mannose binding lectin 85 187 IPR001480 -
Trre16g01773 797 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 443 554 - -
Trre16g01773 797 Pfam Protein tyrosine and serine/threonine kinase 482 749 IPR001245 GO:0004672|GO:0006468
Trre16g01773 797 PIRSF SRK 9 282 IPR024171 GO:0004674
Trre16g01773 797 PIRSF SRK 283 796 IPR024171 GO:0004674
Trre16g01773 797 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 139 774 - -
Trre16g01773 797 SUPERFAMILY Protein kinase-like (PK-like) 463 765 IPR011009 -
Trre16g01773 797 Pfam PAN-like domain 326 363 IPR003609 -
Trre16g01773 797 Gene3D Phosphorylase Kinase; domain 1 433 554 - -
Trre16g01773 797 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 555 757 - -
Trre16g01773 797 Gene3D Transferase(Phosphotransferase) domain 1 555 762 - -
Trre16g01773 797 SMART blect_4 36 162 IPR001480 -
Trre16g01773 797 SMART serkin_6 479 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01773 Trre-Chr16 14137884 14141360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01773 467 786 Receptor kinase-like Gene Family AT3G45860 56.832 1.29e-124 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre16g01773 PK_Tyr_Ser-Thr 1.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01773 - - gmx:100816869 916.376