Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01771 ATGGAAGACTTAAACATGTGGCTCTCTTTCTATATGAATGAAAGTGACAACCATGATTTCCCCATCAGAAGGTTTTGCCCTGCAAGAATGGAGCAAGATCAAGGAGGAGAGTGCCATGACCAAGAAACAGTACTTGATCATATTGAATTGTGTACTTTTGATACAACTAAAACTCCTTGTTTATTAGCTTCTTCAGAAGTTGATGATTTTGTTGATAGCTTCATCAACATGGAACACTGTGAAGATCAAGAGTCTCAAGAGAATCATCATCATCAAAGTTTTGATCACTTTGTCGTGAATGAAGAAGATGTTGATGATGATGTTGATGCATACTCCATTGGATATGTTCCAACCACAATGGAGGATGAAGAATTAGAGATATGTGAGAATACCACAATCACAATGGAGGAAGAAGACGTTGAAATCAACGGTGCTTTTGGTGCTATACCACAAGCACGAGCCAGTCTCGGTATGAACCAAGGTCTTGACTTGGTCCATACGTTGCTGGCTTGTGCTGAGGCCGTAGGCTGTAGAGACAACCATCAGGCAAATTTGTTACTTGGTAAAATTTTGGCTATGGCAAATCCTTCAGGAGATTCATTGCAAAGAGTTTCTTACTATTTTGCCAAAGGATTGAAGTGTAGGTTATCACTTTATCCTCATAATAATGTATTTTCAAATGGTGCACTCACAACAAGTGCTTCTAATGATGTTTCTTTGATCACTAGGGAAAATAAGTTGGAAGCTTTTCAACTTCTTTACCAAACAACACCATACATTACTTTTGGTTTCATGGCTGCAAATGAAGCTATATGCCAAGGATCAAAAGGTAAAAGCTCAATACACATAATTGATTTAGAAATGGAGCATACTCTTCAATGGTCTTCCCTTATAAGGAACCTTGCTTCGAGGCCCGAGGGGCCTCCAAGGCTCAAGATAACAGGATTCAGTACGAACGAAGAAAACAATGTGAAACTTCACACTAGCATGAATTTTCTTGTGGAGGAAGCAATCTCATTAGGAATAGTCCTTGAATTTCGCATAATATCAGAGCCGGCAACACCTTCTTTTCTTACAATTGAGAACCTCAACTTAAGAGAAGGTGAATCATTATTTGTTAATAGCATCTTGAAATTGCACAAATATGTGAAAGAAAGTAGAGGTTATCTAAAAGCAATTCTTCAATCAATCAAGAAGCTAAGTCCAATTGCAGTTACAGTTGTAGAGCAAGACACAAACCACAATGGACCTTTCTTTCTAGGAAGGTTTTTAGAATCACTTCACTATTACTCAGCAATATTTGATTCTCTTGAAGCATGTATGCCAAGAAATAGTCCTATTAGGATGAAAATAGAGAAAGCACATTTTGCAGAAGAAATTTGTAACATTGTTGCTTATGAGGGTCCTGATAGAATGGAGAGACATGAAAGAGTAGATCAATGGAGAAGACAATTAGGAAGAGCAGGATTTCATGTAATGCCACTCAAATGTACAAGTCAAGCTAGAATGATGCTTTCTGTTTATGATTGTGATGGATATACATTGTCATGTGAAAAGGGCTGTCTTTTACTTGGTTGGAAAGGAAGGCCTATTATGATGGCTTCTGCTTGGCAAGTGGCAAGTTTCTTATAA 1632 0.3781 MEDLNMWLSFYMNESDNHDFPIRRFCPARMEQDQGGECHDQETVLDHIELCTFDTTKTPCLLASSEVDDFVDSFINMEHCEDQESQENHHHQSFDHFVVNEEDVDDDVDAYSIGYVPTTMEDEELEICENTTITMEEEDVEINGAFGAIPQARASLGMNQGLDLVHTLLACAEAVGCRDNHQANLLLGKILAMANPSGDSLQRVSYYFAKGLKCRLSLYPHNNVFSNGALTTSASNDVSLITRENKLEAFQLLYQTTPYITFGFMAANEAICQGSKGKSSIHIIDLEMEHTLQWSSLIRNLASRPEGPPRLKITGFSTNEENNVKLHTSMNFLVEEAISLGIVLEFRIISEPATPSFLTIENLNLREGESLFVNSILKLHKYVKESRGYLKAILQSIKKLSPIAVTVVEQDTNHNGPFFLGRFLESLHYYSAIFDSLEACMPRNSPIRMKIEKAHFAEEICNIVAYEGPDRMERHERVDQWRRQLGRAGFHVMPLKCTSQARMMLSVYDCDGYTLSCEKGCLLLGWKGRPIMMASAWQVASFL 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01771 543 Pfam GRAS domain family 164 538 IPR005202 -
Trre16g01771 543 ProSiteProfiles GRAS family profile. 155 538 IPR005202 -
Trre16g01771 543 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 121 537 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01771 Trre-Chr16 14120388 14122019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01771 161 539 GRAS Transcription Factor Family AT1G66350 37.403 3.79e-74 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trre16g01771 GRAS 1.4e-106 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01771 - - mtr:25502341 917.531