Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01765 ATGGCAGAGGATTTGATATTGTTGGATGAATGGCTTAGTATGTTTGGTATGAGAGCAAGGATAGCATTGGCTGAAAAAGGTATAAAGTATGAGTACAAGGAAGAAGATCTTGAGAACAAGAGCCAAATGCTTTTAGAAATGAACCCAATTCACAAGAAGATTCCAGTTCTTATCCATAATGGAAAACCCATTTGTGAGTCCATCATTATTGTTGAGTATATTGATGAGGTTTGGAATGATAAAGTTCCATTTCTGCCCTTAGATCCTTATCAGAGAGCTCAAGCCAAGTTTTGGGCTGATTTTGTCAACAAGAAGGTTGGTGATGTTGGTGGGAGGATATGGGCCGGAAAGAGAGATGAGATTGAAGTGGCAAAGAAGGAGTTGATTGAAGGGTTAAAGGAATTGGAGAATGTCCTTGGAGACAAGCCTTATTTTGGTGGTGAAACATTTGGGTTTGTTGACATTGCTTTGATCCCTTTCTATAGCTGGTTTTATACTTATGAACAATTAGGAAACTTCAAAGTGGAGGCAGAGTGTGATAAGTTGATTTCTTGGGCAAAGAGATGCAAGGAGAGGGAAAGTGTTTCCAAATCTGTTGCTGATGAGAAAGAGGCATATGAGTATGTTGTTAACTATAGGAAGAGGTTTCAATTGGATTGA 660 0.3879 MAEDLILLDEWLSMFGMRARIALAEKGIKYEYKEEDLENKSQMLLEMNPIHKKIPVLIHNGKPICESIIIVEYIDEVWNDKVPFLPLDPYQRAQAKFWADFVNKKVGDVGGRIWAGKRDEIEVAKKELIEGLKELENVLGDKPYFGGETFGFVDIALIPFYSWFYTYEQLGNFKVEAECDKLISWAKRCKERESVSKSVADEKEAYEYVVNYRKRFQLD 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01765 219 Gene3D - 88 219 - -
Trre16g01765 219 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Trre16g01765 219 Gene3D Glutaredoxin 1 87 - -
Trre16g01765 219 CDD GST_C_Tau 89 209 IPR045074 GO:0004364|GO:0006749
Trre16g01765 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Trre16g01765 219 FunFam Tau class glutathione S-transferase 1 87 - -
Trre16g01765 219 CDD GST_N_Tau 5 78 - -
Trre16g01765 219 SFLD Glutathione Transferase (cytosolic) 2 217 IPR040079 -
Trre16g01765 219 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Trre16g01765 219 SUPERFAMILY Thioredoxin-like 5 105 IPR036249 -
Trre16g01765 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 205 IPR045073 -
Trre16g01765 219 Pfam Glutathione S-transferase, C-terminal domain 121 188 - -
Trre16g01765 219 SUPERFAMILY GST C-terminal domain-like 76 216 IPR036282 -
Trre16g01765 219 Coils Coil 118 138 - -
Trre16g01765 219 FunFam Glutathione S-transferase U20 88 219 - -
Trre16g01765 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 212 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01765 Trre-Chr16 14035054 14036185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01765 1 219 Glutathione S-transferase Gene Family AT1G17180 63.470 2.10e-101 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01765 K00799 - qsu:111999493 320.087