Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01735 ATGTTTTTTGTTTCTACACTTCTCATCAAACATACCCAAAAATCTAAAAAACCTAAACTACCCCCTGGTCCTACACCTTGGCCTATTGTAGGTAACCTACCTGAAATGCTTGCAAATAGGCCAACATTTAGATGGATACAAAAAATGATGAATGATATGAATACAAAAATTGCATGCATTCGTTTAGGTAATGTTCATGTCATTACAGTTAGTGATCCTGAAATTGCACGTGAAATATGTATTAAACAAGATGCAATTTTTGCTTCAAGACCAAGTAGTTGGTCAAATGAATATGTTACTAAAGGATATTTGACAACAGCATTGACTCCATTTGGAGAACAATGGAAGAAAATTAAGAAATTAATTAGTAATGAATTAGTTTCACCTCTTAGACATCAATGGCTTCATGATAAGAGAGTGGAAGAAGCTGATAATATTGTTAGGTATGTTTATAATCAATGTACTAAAATTGGTGGTGATGGAATTGTTAATGTTAGTGTTACTGCACAACATTATACAGGGAATGTTATTAGGAGGTTGCTTTTGAATACTAGGTATTTTGGAAATGGTAGTGATGATTTTGGACCTGGTTTTGAGGAAGTTGAATATGTTGAAGCTGTTTTTACTGTTTTGCAATATCTTTTTGCTTTCTCTGTTTCTGATTTTATGCCATGTTTGAGGGGTTTTGATTTGGATGGTCATGAGAAGATTCTTAAGAAGGCTTGTAAGACCATGAAGAAATATCATGACCCTGTAATTGAAGATAGAATTCAAGAATGGAAGAATGGGAAAAGGACTTATAAAGAAGATTTGCTTGATGTTCTCATCTCACTCAAAGATGCTGACAACAATGACCTTTTGACAGAGCAGGAGATTAAGTCTAATGTTTTGGAATTGACACTTGCAGCTGTTGATAATCCATCAAATGCAGTTGAATGGGGACTTGCTGAAATGATAAATCAACCTGAGCTACTTAAAAAAGCTACAGAAGAATTAGACAGTGTAGTTGGAAAAGAAAGACTGGTGCAAGAATATGATTTTCCCAAACTCAACTATGTGAAAGCTTGTGCTAGAGAAGCTTTTCGCCTTCATCCAATTTGTGATTTCAACCTTCCCCATGTCGCGATGAAAGACACAGTTGTTGCTGATTACTTTATACCAAAAGGTAGCCATGTCTATTTAAGGAGACAAGGACTTGGCCTAAACCCTAATGTATGGGAAGAACCACTCATGTTCAAGCCGGAACGACATCTTAAAAAAGATGGGTCTAATTTGAGTTTGACAGAATCGAGTTTTGATTTGGTAACATTTAGCACCGGAAGGCGAGGGTGTTCCGGTGTCATGCTTGGATCTTCAATGACTATTATGCTATTTGCAAGGTTGCTTCATGGATTCACTTGGAGTGTGCCACCAAACCAATCTTGCATTGATCTTTCTGAGTCTCATGGAGGTACCACAAAAGCTAAGCCACTTGTGGCTGTGGCAAAGCCAAGGTTACCAAAAGAGGCTTATGGATTATACTAA 1524 0.3661 MFFVSTLLIKHTQKSKKPKLPPGPTPWPIVGNLPEMLANRPTFRWIQKMMNDMNTKIACIRLGNVHVITVSDPEIAREICIKQDAIFASRPSSWSNEYVTKGYLTTALTPFGEQWKKIKKLISNELVSPLRHQWLHDKRVEEADNIVRYVYNQCTKIGGDGIVNVSVTAQHYTGNVIRRLLLNTRYFGNGSDDFGPGFEEVEYVEAVFTVLQYLFAFSVSDFMPCLRGFDLDGHEKILKKACKTMKKYHDPVIEDRIQEWKNGKRTYKEDLLDVLISLKDADNNDLLTEQEIKSNVLELTLAAVDNPSNAVEWGLAEMINQPELLKKATEELDSVVGKERLVQEYDFPKLNYVKACAREAFRLHPICDFNLPHVAMKDTVVADYFIPKGSHVYLRRQGLGLNPNVWEEPLMFKPERHLKKDGSNLSLTESSFDLVTFSTGRRGCSGVMLGSSMTIMLFARLLHGFTWSVPPNQSCIDLSESHGGTTKAKPLVAVAKPRLPKEAYGLY 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01735 507 Pfam Cytochrome P450 21 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01735 507 FunFam Cytochrome P450 9 13 502 - -
Trre16g01735 507 SUPERFAMILY Cytochrome P450 21 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01735 507 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01735 507 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01735 507 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01735 507 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01735 507 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01735 507 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01735 507 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01735 507 PRINTS E-class P450 group I signature 75 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01735 507 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 4 504 - -
Trre16g01735 507 ProSitePatterns EF-hand calcium-binding domain. 280 292 IPR018247 -
Trre16g01735 507 Gene3D Cytochrome P450 6 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01735 Trre-Chr16 13866889 13869264 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01735 16 504 Cytochrome P450 AT4G39950 54.898 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01735 - K12153 minc:123210872 662.529