Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01734 ATGGAATCTCTGATTTTCTCTGATCACCAATTGTTACCATCATTTTGGTGTTTCATTCTCATGTTTTTTGTTTCTACACTTCTCATCAAACATACCCAAAAATCTAAAAAACCTAAACTACCCCCTGGTCCTACACCTTGGCCTATTGTAGGTAACCTACCTGAAATGCTTGCAAATAGGCCAACATTTAGATGGATACAAAAAATGATGAATGATATGAATACAAAAATTGCATGCATTCGTTTAGGTAATGTTCATGTCATTACAGTTAGTGATCCTGAAATTGCACGTGAAATATGTATTAAACAAGATGCAATTTTTGCTTCAAGACCAAGTAGTTGGTCAAATGAATATGTTACTAAAGGATATTTGACAACAGCATTGACTCCATTTGGAGAACAATGGAAGAAAATTAAGAAATTAATTAGTAATGAATTAGTTTCACCTCTTAGACATCAATGGCTTCATGATAAGAGAGTGGAAGAAGCTGATAATATTGTTAGGTATGTTTATAATCAATGTACTAAAATTGGTGGTGATGGAATTGTTAATGTTAGTGTTACTGCACAACATTATACAGGGAATGTTATTAGGAGGTTGCTTTTGAATACTAGGTATTTTGGAAATGGTAGTGATGATTTTGGACCTGGTTTTGAGGAAGTTGAATATGTTGAAGCTGTTTTTACTGTTTTGCAATATCTTTTTGCTTTCTCTGTTTCTGATTTTATGCCATGTTTGAGGGGTTTTGATTTGGATGGTCATGAGAAGATTCTTAAGAAGGCTTGTAAGACCATGAAGAAATATCATGACCCTGTAATTGAAGATAGAATTCAAGAATGGAAGAATGGGAAAAGGACTTATAAAGAAGATTTGCTTGATGTTCTCATCTCACTCAAAGATGCTGACAACAATGACCTTTTGACAGAGCAGGAGATTAAGTCTAATGTTTTGGAATTGACACTTGCAGCTGTTGATAATCCATCAAATGCAGTTGAATGGGGACTTGCTGAAATGATAAATCAACCTGAGCTACTTAAAAAAGCTACAGAAGAATTAGACAGTGTAGTTGGAAAAGAAAGACTGGTGCAAGAATATGATTTTCCCAAACTCAACTATGTGAAAGCTTGTGCTAGAGAAGCTTTTCGCCTTCATCCAATTTGTGATTTCAACCTTCCCCATGTCGCGATGAAAGACACAGTTGTTGCTGATTACTTTATACCAAAAGGTAGCCATGTCTATTTAAGGAGACAAGGACTTGGCCTAAACCCTAATGTATGGGAAGAACCACTCATGTTCAAGCCGGAACGACATCTTAAAAAAGATGGGTCTAATTTGAGTTTGACAGAATCGAGTTTTGATTTGGTAACATTTAGCACCGGAAGGCGAGGGTGTTCCGGTGTCATGCTTGGATCTTCAATGACTATTATGCTATTTGCAAGGTTGCTTCATGGATTCACTTGGAGTGTGCCACCAAACCAATCTTGCATTGATCTTTCTGAGTCTCATGGAGGTACCACAAAAGCTAAGCCACTTGTGGCTGTGGCAAAGCCAAGGTTACCAAAAGAGGCTTATGGATTATACTAA 1584 0.3655 MESLIFSDHQLLPSFWCFILMFFVSTLLIKHTQKSKKPKLPPGPTPWPIVGNLPEMLANRPTFRWIQKMMNDMNTKIACIRLGNVHVITVSDPEIAREICIKQDAIFASRPSSWSNEYVTKGYLTTALTPFGEQWKKIKKLISNELVSPLRHQWLHDKRVEEADNIVRYVYNQCTKIGGDGIVNVSVTAQHYTGNVIRRLLLNTRYFGNGSDDFGPGFEEVEYVEAVFTVLQYLFAFSVSDFMPCLRGFDLDGHEKILKKACKTMKKYHDPVIEDRIQEWKNGKRTYKEDLLDVLISLKDADNNDLLTEQEIKSNVLELTLAAVDNPSNAVEWGLAEMINQPELLKKATEELDSVVGKERLVQEYDFPKLNYVKACAREAFRLHPICDFNLPHVAMKDTVVADYFIPKGSHVYLRRQGLGLNPNVWEEPLMFKPERHLKKDGSNLSLTESSFDLVTFSTGRRGCSGVMLGSSMTIMLFARLLHGFTWSVPPNQSCIDLSESHGGTTKAKPLVAVAKPRLPKEAYGLY 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01734 527 Gene3D Cytochrome P450 26 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01734 527 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01734 527 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01734 527 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01734 527 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01734 527 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01734 527 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01734 527 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01734 527 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01734 527 ProSitePatterns EF-hand calcium-binding domain. 300 312 IPR018247 -
Trre16g01734 527 FunFam Cytochrome P450 9 33 522 - -
Trre16g01734 527 SUPERFAMILY Cytochrome P450 41 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01734 527 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 14 524 - -
Trre16g01734 527 Pfam Cytochrome P450 41 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01734 Trre-Chr16 13866889 13869324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01734 2 524 Cytochrome P450 AT4G39950 52.952 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01734 - K12153 gmx:100809902 667.151