Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01703 ATGAAAAGATCATCCAAACATGATATTGAAGATATAGAAAATTCAGAACAAAAGCATGAAGAGGTGAAAGAGGATTTGATCATTTTTCAAGGTGGAGAAGATTTAACAATATGTGATATATTGGATGCACCAGGGGAAGTGATTGGAAAATCAAATTATGGAACACTTTATAAGGCTTTGTTACAAAGAAGTAACAAAGTGCGGTTGTTGAGGTTTTTGAGACCTGTTTGTACTACTAGAGGTGAAGAATTGGATGAAATGATTTTGTTTCTTGGAAGATTAAAACATCCTAATTTGGTTCCTCTTTTGGGATTTTATACTGGACCAAGAGGTGAGAAGCTTCTTGTTCATCCATTTTATAGACATGGAAATCTTACTCAATTCATAAGAGATGGAAATGGTGAGAGTTATAAATGGTCAAATATATACACAATATCAATTGGTATAGCAAAAGGATTAGAACATCTTCACACAGAATATGAAAAGCCAATTATTCATGGAAACCTAAAGTCGAAAAACATCCTTTTAGACAGTTCCTATCAGCCACACATCTCAGATTCAGGTCTCCATCTTTTGTTGAATCCAACTGCTGGCCAAGAAATGCTTGAAAGTTCATCTGCTCAAGGCTATAAAGCACCTGAACTCATCAAAATGAAGGATGCTAGCGAAGAAACCGATATATATAGCCTCGGTGTAATCTTGCTTGAATTGCTTTCAGGAAAGGAACCTATCAATGAACATCCAACTCCTGATGAGGATTTCTATTTGCCGAATTTTATGAGAAATGCGGTTCTTGGACATAGAATTTCCGATTTATATCATCCCGCTATTCTTCTCAGAAACGGCATGGACGATGAAATTCAAGTTACGGAAGAATGTGTTCTTAAATTTTTTCAACTTGCTATGGCTTGTTGTTCTCCTTCACCTTCAATTAGACCTAACATAAGGCAAGTTATTAGGAAACTTGAAGAAATTGTCCACTAG 984 0.3557 MKRSSKHDIEDIENSEQKHEEVKEDLIIFQGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSNKVRLLRFLRPVCTTRGEELDEMILFLGRLKHPNLVPLLGFYTGPRGEKLLVHPFYRHGNLTQFIRDGNGESYKWSNIYTISIGIAKGLEHLHTEYEKPIIHGNLKSKNILLDSSYQPHISDSGLHLLLNPTAGQEMLESSSAQGYKAPELIKMKDASEETDIYSLGVILLELLSGKEPINEHPTPDEDFYLPNFMRNAVLGHRISDLYHPAILLRNGMDDEIQVTEECVLKFFQLAMACCSPSPSIRPNIRQVIRKLEEIVH 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01703 327 ProSiteProfiles Protein kinase domain profile. 42 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g01703 327 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 16 325 - -
Trre16g01703 327 Gene3D Phosphorylase Kinase; domain 1 8 119 - -
Trre16g01703 327 Pfam Protein tyrosine and serine/threonine kinase 46 322 IPR001245 GO:0004672|GO:0006468
Trre16g01703 327 Gene3D Transferase(Phosphotransferase) domain 1 121 327 - -
Trre16g01703 327 SUPERFAMILY Protein kinase-like (PK-like) 45 323 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01703 Trre-Chr16 13617510 13619440 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01703 11 325 Carbohydrate Esterase AT5G61570 61.231 2.29e-139 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre16g01703 PK_Tyr_Ser-Thr 2.8e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01703 - - gmx:100788898 577.785