Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01702 ATGCTGATATTAGTTCTAGGACTAATTTCAGCTACTTTGTTAGTGATTGTTGCAATTTATGGCTTTTGCTATATGAAAAGATCATCCAAACATGATATTGAAGATATAGAAAATTCAGAACAAAAGCATGAAGAGGTGAAAGAGGATTTGATCATTTTTCAAGGTGGAGAAGATTTAACAATATGTGATATATTGGATGCACCAGGGGAAGTGATTGGAAAATCAAATTATGGAACACTTTATAAGGCTTTGTTACAAAGAAGTAACAAAGTGCGGTTGTTGAGGTTTTTGAGACCTGTTTGTACTACTAGAGGTGAAGAATTGGATGAAATGATTTTGTTTCTTGGAAGATTAAAACATCCTAATTTGGTTCCTCTTTTGGGATTTTATACTGGACCAAGAGGTGAGAAGCTTCTTGTTCATCCATTTTATAGACATGGAAATCTTACTCAATTCATAAGAGATGGAAATGGTGAGAGTTATAAATGGTCAAATATATACACAATATCAATTGGTATAGCAAAAGGATTAGAACATCTTCACACAGAATATGAAAAGCCAATTATTCATGGAAACCTAAAGTCGAAAAACATCCTTTTAGACAGTTCCTATCAGCCACACATCTCAGATTCAGGTCTCCATCTTTTGTTGAATCCAACTGCTGGCCAAGAAATGCTTGAAAGTTCATCTGCTCAAGGCTATAAAGCACCTGAACTCATCAAAATGAAGGATGCTAGCGAAGAAACCGATATATATAGCCTCGGTGTAATCTTGCTTGAATTGCTTTCAGGAAAGGAACCTATCAATGAACATCCAACTCCTGATGAGGATTTCTATTTGCCGAATTTTATGAGAAATGCGGTTCTTGGACATAGAATTTCCGATTTATATCATCCCGCTATTCTTCTCAGAAACGGCATGGACGATGAAATTCAAGTTACGGAAGAATGTGTTCTTAAATTTTTTCAACTTGCTATGGCTTGTTGTTCTCCTTCACCTTCAATTAGACCTAACATAAGGCAAGTTATTAGGAAACTTGAAGAAATTGTCCACTAG 1056 0.3532 MLILVLGLISATLLVIVAIYGFCYMKRSSKHDIEDIENSEQKHEEVKEDLIIFQGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSNKVRLLRFLRPVCTTRGEELDEMILFLGRLKHPNLVPLLGFYTGPRGEKLLVHPFYRHGNLTQFIRDGNGESYKWSNIYTISIGIAKGLEHLHTEYEKPIIHGNLKSKNILLDSSYQPHISDSGLHLLLNPTAGQEMLESSSAQGYKAPELIKMKDASEETDIYSLGVILLELLSGKEPINEHPTPDEDFYLPNFMRNAVLGHRISDLYHPAILLRNGMDDEIQVTEECVLKFFQLAMACCSPSPSIRPNIRQVIRKLEEIVH 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01702 351 Pfam Protein tyrosine and serine/threonine kinase 70 346 IPR001245 GO:0004672|GO:0006468
Trre16g01702 351 SUPERFAMILY Protein kinase-like (PK-like) 69 347 IPR011009 -
Trre16g01702 351 ProSiteProfiles Protein kinase domain profile. 66 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g01702 351 Gene3D Transferase(Phosphotransferase) domain 1 145 351 - -
Trre16g01702 351 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 37 349 - -
Trre16g01702 351 Gene3D Phosphorylase Kinase; domain 1 67 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01702 Trre-Chr16 13617438 13619440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01702 23 349 Carbohydrate Esterase AT5G61570 59.172 5.46e-139 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre16g01702 PK_Tyr_Ser-Thr 3.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01702 - - gmx:100788898 604.749