Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01701 ATGGAAGGTGGAAACAGAGCCGAAGCTGAGCGGTGGCTTTACACCGCAAACAAGCTCCTTAGCGCACGTGATCTACACGGTGCACGTTCCTTCGCGATCCGTGCTCGAGAATCTGACCCTACTTTCGATGCATCTGAGCTTCTACTTGCTGTAATCGACACTCTCCTCGCCGGAGAAGCAAGAATCAACGATCACCACACTGATTGGTATGGAATCCTTCAAATCCTTCGTTACACAACAAATATTGACCACATCGCTAATCAGTATCGTCGTCTTGCTCTTCTACTTGACCCTAATCGTAACCCTTTCGCTTTCTCCGGTCACGCTTTTTCCCTTGTTCATGATGCTTGGTCTGTTCTCTCTAATCCTGCTAAGAAGGCTATGTACGATAGTGACCTAAGATTGCACACTACTCCGCCGGTTCCGCCGCCGCAGCCGCAGCCTCTTCCGCAGCAGCATCAGTATCAGCAGCAGCATCAGACAAATAACCCTACGCCGAAGAAAAACCCTAGATCGAGGGAGGGTGTTGCTGAGCCGATTCGGCAGAATCGGAACCCTAGCGAGTCTGCTGAGCCGACTCGGCAGACACGGATGGCGAGTGCTGCTGAAACGGACGGTAAGATTAGCTTCTGGACTTTGTGCCCTTACTGTTACGTTTATTATGAGTATCCGAAAGTGTATGAAGAGTGTACTTTACGGTGTCAGAGTTGTCGGAGGGGGTTTCATGCGGTGGTGATACGTTCGCCTCCGTTGAATGAGATAGATTCTTCGTTTTGTACTTGGGGGTTTTTTCCTTTAGGGTTTTCTGGTGATTCCAAAGATGTGAATGGTGCTTCTTCTAATTGGAACCCTATTGCACCTTTATTTCCCTCTTCCATGAAAGGATCTAACAATAGGAAAAAGAATTGGGTTTACTATGATGAAGAGCAAACTGCGGCATTTATCGATATTTCTGATCCGAGTGATGATGATTCTGATGACGGGGATTGGAGGGGTGGTATTGGTAAGAGGAAACGGGGGAAGAGGTCTGGGGTTAGTACTAGCAAAAAGATTAGGAAAGATTCTGGTAATGCTGGTGGCAGGGAAGCTGTGGAGAGACCTAGGAGGAGTGCTATTGGTGCTGCTGCAGGGAATGTGAATGAGAAGAATGTTGGGGCTGTTGACGCTGCTGGTGTGAAGGCAGATACTAATACTAGTAAGAAAGCTGTACCGAGTAGTTCTAGGAGAAGGGGTGCTGGAAATTTGGATTTGAATGTAGAGTTCAGTAATGATGTGGAGGAGCCTTCCCGTGTAGTGCGTGCCCGTGAAGGGAATCCAACTGGCAATGCTGAGGATAATATTGAAGGGATTGGATTTTTTGAAGGCCTTGATGAGTTCCTCAGAAGTTTGCCAATTCTTAATGTGGTGGGAGATGATAAGACATGGGAATCTTACTCAATTCATAAGAGGTTCGAGGTTTTTGACCATGGAAAGTTTGATGCTTGGGTGGAAAAGGGTGTAGCCCCAGCAATAGAACCCAGTTTAAAACTCTATGAAGATGTTTTGAATCTGGGGTATAAGGTCATTCTACTTACAGGGTGGAAAGAAAGTCATAGGGCTGTTACTGTTGATAATTTGATAAACGCTGGTTTTCGGGATTGGCACCAGCTCATATTAAGATCCTCAGATGATAAAGGAAAACTAGCTGTAATTTACAAATCAGAGAAGAGAAGTGAGATGGAGAAAGATGGATACAGGATTCTTGGAAATTCTGGTGATCAGTGGAGTGATTTATTAGGTTCTTCAGTATCTGTTAGGTCTTTCAAGGAGTAG 1812 0.4581 MEGGNRAEAERWLYTANKLLSARDLHGARSFAIRARESDPTFDASELLLAVIDTLLAGEARINDHHTDWYGILQILRYTTNIDHIANQYRRLALLLDPNRNPFAFSGHAFSLVHDAWSVLSNPAKKAMYDSDLRLHTTPPVPPPQPQPLPQQHQYQQQHQTNNPTPKKNPRSREGVAEPIRQNRNPSESAEPTRQTRMASAAETDGKISFWTLCPYCYVYYEYPKVYEECTLRCQSCRRGFHAVVIRSPPLNEIDSSFCTWGFFPLGFSGDSKDVNGASSNWNPIAPLFPSSMKGSNNRKKNWVYYDEEQTAAFIDISDPSDDDSDDGDWRGGIGKRKRGKRSGVSTSKKIRKDSGNAGGREAVERPRRSAIGAAAGNVNEKNVGAVDAAGVKADTNTSKKAVPSSSRRRGAGNLDLNVEFSNDVEEPSRVVRAREGNPTGNAEDNIEGIGFFEGLDEFLRSLPILNVVGDDKTWESYSIHKRFEVFDHGKFDAWVEKGVAPAIEPSLKLYEDVLNLGYKVILLTGWKESHRAVTVDNLINAGFRDWHQLILRSSDDKGKLAVIYKSEKRSEMEKDGYRILGNSGDQWSDLLGSSVSVRSFKE 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01701 603 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 358 - -
Trre16g01701 603 MobiDBLite consensus disorder prediction 182 201 - -
Trre16g01701 603 Gene3D - 472 602 IPR023214 -
Trre16g01701 603 Gene3D DnaJ domain 57 139 IPR036869 -
Trre16g01701 603 ProSiteProfiles dnaJ domain profile. 68 133 IPR001623 -
Trre16g01701 603 MobiDBLite consensus disorder prediction 134 201 - -
Trre16g01701 603 CDD DnaJ 68 122 IPR001623 -
Trre16g01701 603 MobiDBLite consensus disorder prediction 151 169 - -
Trre16g01701 603 MobiDBLite consensus disorder prediction 316 371 - -
Trre16g01701 603 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Trre16g01701 603 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 482 597 IPR005519 -
Trre16g01701 603 MobiDBLite consensus disorder prediction 354 368 - -
Trre16g01701 603 Pfam DnaJ domain 68 130 IPR001623 -
Trre16g01701 603 SMART dnaj_3 67 125 IPR001623 -
Trre16g01701 603 SUPERFAMILY Chaperone J-domain 64 133 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01701 Trre-Chr16 13600356 13605477 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01701 8 473 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 42.008 7.75e-100 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01701 - - cam:101509006 672.93