Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01698 ATGGACTTGTTACCAAGTTCAGCACTTTCCTACCTACTAGTTTTCACATTTTCTCTCCTTTTCCTTCTCAAATTTCTCATTCCAAAAAACAAAATCAACCAAAAAAATCCCTCCAAACTTCCACCTGGTCCTTCACCACTTCCCATAATAGGAAACCTTCTAAAACTAGGTAACAAACCACATCATTCCTTAGCAAACCTTTCCAACATTCATGGCCCAATTATGACACTAAAATTAGGCCAAGTTACAACCATAGTAATTTCTTCGGCAGACATAGCAAAAGAAGTTCTACAAACGCATGACATTTTATTGTCAAACCGAACCGTCCCGGACGCACTATCTGTTCTCAATCATGACCAATATAGTTTATCTTTTATGCGCGTTTCTCCGCGCTGGCGCGACCTTAGAAAAATTTGCAATTACCAGTTGTTTTCAACCAAAACGCTTGACTCTAGCCAGGCGTTGAGGCGTAGGAAATTACAAAATCTTCTTGATGACATCGAAAAGTGTAGTGAAAATCAAGAAGCTGTGGATATTGGAAAAGTTGCTTTCAAGACGACGATTAATTTGTTGTCGAATACTTTTTTTTCGACCGATTTTGTTCATTCGGCCGAGGAAGCTGGGGAGTATAAGGAGATTGTTGTGAGTATATTGAAGGAAGTTGGAGCGCCGAATTTGTCGGATTTTTTTCCTAAGTTGAAGTTTTTAGATTTGCAGGGGATTAGAAAGCGTTCAATTGTTTCTGTTAAGAAGGTTTTGAGTATTTTTAAGAGATTTGTTGGGGAGAGATTGAAGATGAGAGAAGGTACTGGTTCTATTGGGAATGATGATGTTCTTGATGCTTTGCTTAATATTTCTTTGGATGATGGAAAGATTGAGATGGATAAAGATGAAATAGAACATTTGTTGCTGAACATATTTGTTGCAGGAACAGACACAACAACTTACACACTAGAGTGGGCAATGGCGGAGTTAATGCACAATTCAGAAATCATGTCAAAAGTGAAAAATGAACTCGAACAAGCTGTTGGCAAAGGTATTCCAATACAAGAAATGGACATACCTAAACTACCTTACATGCAAGCAGTTATAAAAGAGACATTTCGGTTACATCCGGCTGTTCCTTTATTACTTCCTCGTAAAGCCGAAATCAATGTCCAAATTGGAGACTACATTATTCCAAAAGATGCACAAGTTTTGGTCAATGCTTGGGTTATTGGTAGAGATCCAAATAAATGGGATAATCCTAATGTTTTTTTACCAGAGAGATTTTTGGATTCTGAAATTGATGTTAAGGGACATCATTTTGAGCTTATTCCATTTGGATCTGGTAGAAGAATTTGTCCTGGTTTGCCTTTGGCTATTAGAATGTTGCCTTTGATGTTGGGATCTTTGATTAATTGCTTTAATTGGAAACTTGAAGATGGAATTAATGCTGACGACTTGAATAAGGAAGATGAATATGGGATTACTTTGGAAAAATCTCAACCGGTCAGAATTGTTCCAATCAAATTGACTAAGTAA 1524 0.372 MDLLPSSALSYLLVFTFSLLFLLKFLIPKNKINQKNPSKLPPGPSPLPIIGNLLKLGNKPHHSLANLSNIHGPIMTLKLGQVTTIVISSADIAKEVLQTHDILLSNRTVPDALSVLNHDQYSLSFMRVSPRWRDLRKICNYQLFSTKTLDSSQALRRRKLQNLLDDIEKCSENQEAVDIGKVAFKTTINLLSNTFFSTDFVHSAEEAGEYKEIVVSILKEVGAPNLSDFFPKLKFLDLQGIRKRSIVSVKKVLSIFKRFVGERLKMREGTGSIGNDDVLDALLNISLDDGKIEMDKDEIEHLLLNIFVAGTDTTTYTLEWAMAELMHNSEIMSKVKNELEQAVGKGIPIQEMDIPKLPYMQAVIKETFRLHPAVPLLLPRKAEINVQIGDYIIPKDAQVLVNAWVIGRDPNKWDNPNVFLPERFLDSEIDVKGHHFELIPFGSGRRICPGLPLAIRMLPLMLGSLINCFNWKLEDGINADDLNKEDEYGITLEKSQPVRIVPIKLTK 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01698 507 FunFam Cytochrome P450 76C4 32 501 - -
Trre16g01698 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Trre16g01698 507 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01698 507 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01698 507 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01698 507 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01698 507 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01698 507 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01698 507 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01698 507 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01698 507 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 17 504 - -
Trre16g01698 507 Gene3D Cytochrome P450 26 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01698 507 CDD CYP76-like 68 502 - -
Trre16g01698 507 Pfam Cytochrome P450 41 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01698 507 SUPERFAMILY Cytochrome P450 41 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01698 507 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01698 507 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01698 507 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01698 Trre-Chr16 13583203 13585096 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01698 1 504 Cytochrome P450 AT2G45550 43.418 6.28e-158 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01698 - - cave:132173603 592.038