Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01697 ATGGTTTTGATACAAAGTTCCACACTTTCCTACCTATATTTCACATTATCTCTATTTCTCCTTGCAAGATTTCTCATCTCAACAAAAAAAATTAATAAAAAAAATCACTCCAAACTTCCACCAGGTCCTTCACCACTTCCCATAATAGGTAACCTTCTAAACCTAGGCAACAAACCACACCATTCTTTAGCTACCCTTTCCAACATTCATGGCCCAATAATGACACTAAAATTTGGCCAAATAACAACCATAGTAGTTTCCTCATCAGACATAGCAAAAGAAATTCTCCAAACACATGACAACTTACTCTCAAACCGAACCGTACCGGACGCACTATCCGTTCTCAATCATGACCAATATAGTTTATCTTTTATGCGCGTTTCGCCTCGTTGGCGTGACCTTAGAAAAATTTGCAATAACCAGTTGTTTTCAAGTAAAACACTCGATTTGAGCCAAGCGCTAAGGCGTAGGAAATTACAAGATCTTCTTGATGATATCGAAAAGTGTAGCGAAAATGAGGAAGCTGTGGATATTGGAAGAGTTGCTTTTAAGACGACGGTTAATTTGTTGTCGAATACTTTTTTCTCGGCGGATTTTGTGCATTCGGCCGAGGAGGCTGGAGAGTATAAGAAGAATGTTGTGAGTATATTGAAGGAAGTTGGAACGCCGAATTTGTCGGATTTTTTTCCTATGTTGAAAGTTTTTGATTTGCAGGGTATTAGAAGGCGTTCAGTTATTTCTGTTAATAAGGTTTTGAGTATTTTTAGGAGATTTGTTGGGGAAAGGTTGAAGTTGAGGGAAGGTACTGGTTCTATTGAAAATGATGATATGCTTGATGCTTTGCTTAATATTTCTTTGGATGATGGGAAGATTGAGATGGATAAAGATGAGATTGAACATTTGTTGCTGAACTTATTTGTTGCAGGAACAGAACCAACAACATACACACTAGAATGGGCAATGGCAGAATTAATGTACAATCCAGAAATCATGTCAAAAGTACAAAAAGAACTCGAACAAGTTGTTGGCAAAGGTATTCCAATACAAGAAACAGACATACCCAAACTACCTTACATGCAAGCAGTTATAAAAGAAACATTTCGTTTGCATCCGGCAGTTCCCTTTTTACTTCCTCGTAAAGCCGAAACAGATGTCAAAATTGGTGACTACATTATTCCAAAAGATGCACAAGTTTTGGTTAATGCTTGGGTTATTGGTAGAGACCCAAATAAATGGGATAATCCTAATGTTTTTCTACCCGAGAGGTTTTTGGATTCCGAAATTGATGTTAAAGGACATCATTTCGAGCTTATTCCATTTGGGTCTGGTAGAAGAATTTGTCCTGGTTTGCCTTTGGCTATTAGAATGTTGCCTTTAATGTTAGGATCTTTGATTAATTGCTTTAGTTGGAAACTTGAAGATGAATTGAATGTTGATGATTTGAATAAGGAAGATGAATATGGTATAACTTTGGAAAAATCTCAACCAGTGAGAATTGTTCCAATTAAATTGACTAAGCAATACAGTGCAGCGGTGCAGTAA 1542 0.369 MVLIQSSTLSYLYFTLSLFLLARFLISTKKINKKNHSKLPPGPSPLPIIGNLLNLGNKPHHSLATLSNIHGPIMTLKFGQITTIVVSSSDIAKEILQTHDNLLSNRTVPDALSVLNHDQYSLSFMRVSPRWRDLRKICNNQLFSSKTLDLSQALRRRKLQDLLDDIEKCSENEEAVDIGRVAFKTTVNLLSNTFFSADFVHSAEEAGEYKKNVVSILKEVGTPNLSDFFPMLKVFDLQGIRRRSVISVNKVLSIFRRFVGERLKLREGTGSIENDDMLDALLNISLDDGKIEMDKDEIEHLLLNLFVAGTEPTTYTLEWAMAELMYNPEIMSKVQKELEQVVGKGIPIQETDIPKLPYMQAVIKETFRLHPAVPFLLPRKAETDVKIGDYIIPKDAQVLVNAWVIGRDPNKWDNPNVFLPERFLDSEIDVKGHHFELIPFGSGRRICPGLPLAIRMLPLMLGSLINCFSWKLEDELNVDDLNKEDEYGITLEKSQPVRIVPIKLTKQYSAAVQ 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01697 513 CDD CYP76-like 67 501 - -
Trre16g01697 513 FunFam Cytochrome P450 76C4 31 500 - -
Trre16g01697 513 Pfam Cytochrome P450 40 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01697 513 SUPERFAMILY Cytochrome P450 37 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01697 513 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01697 513 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01697 513 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01697 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Trre16g01697 513 Gene3D Cytochrome P450 24 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01697 513 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01697 513 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01697 513 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01697 513 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01697 513 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01697 513 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01697 513 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01697 513 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01697 513 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 17 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01697 Trre-Chr16 13574557 13576847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01697 14 503 Cytochrome P450 AT2G45550 43.574 3.70e-158 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01697 - - cave:132173603 573.933