Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01669 ATGCAGGGAATTGTATCCTCAGGAATAAGTATCATTATTGTTGCTTGGTGCATAAAGATGAGAGGCCCTCTCTTTGCATCTGTTTTCTACCCTCTTCAACTTTTACTTATTGCTGTCTCTGCTTATTTGATGTTGGATGAGAAGCTATATTTAGGAAGTATTCTTGGAGCGATGTTGATTGTGTGCGGCCTATATGTAGTGCTTTGGAGTAAGAACAAAGAAATGAAAGAAAATACTCAATTGTTGGTGGATATCCGCGAGAACTGTGGGGATCCACAGGGATGGGGATGGAGGAAGAATTCTCCCCGAAGCGGGGAATGTGGACGGAGAATATTTTAG 339 0.4189 MQGIVSSGISIIIVAWCIKMRGPLFASVFYPLQLLLIAVSAYLMLDEKLYLGSILGAMLIVCGLYVVLWSKNKEMKENTQLLVDIRENCGDPQGWGWRKNSPRSGECGRRIF 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01669 112 SUPERFAMILY Multidrug resistance efflux transporter EmrE 3 73 - -
Trre16g01669 112 PANTHER WAT1-RELATED PROTEIN 2 77 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01669 Trre-Chr16 13328038 13329216 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01669 3 76 Nodulin-like Gene Family AT1G68170 54.054 2.10e-22 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01669 - - mtr:25493310 129.798