Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01663 ATGAAGGGGATATGTAATTCATTGGAAGGACTAATGCCAATCATGCTAATGTTGATTTCTCAGATTGCATTAGCTGCTACAAATATCATATCCAAGCTTGCTATAAATGATGGTATGAGCATGAGAGTGGCTACCGCTTACCGTTTCATTTTTGCGTCGGCTTTCACTATTCCGGTCGCTCTTATTTTTGATAGAAAAAAAAGACCAAAGATTACTTGGAAGGTGTTATATTTGGGATTTTTATCTGGATTGTTTGGGGGAAGTTTATTTGCGAATCTTTACGGTGAGGGCATGGTTTTGACCTCAACAACGTTTATGTTTGCTATGTTCAACCTTACTCCAGGCATTACCTTCATCATGGCAATATTCTTTAGATTGGAAAAACTAAATTGGAGTGTGGTAGAAGGAAAGGCAAAAATGATAGGAACATTAATAGGAATTGGTGGGGCAATGATCATGACATTTTACAAAGGAGCAAAAATTTGA 486 0.3704 MKGICNSLEGLMPIMLMLISQIALAATNIISKLAINDGMSMRVATAYRFIFASAFTIPVALIFDRKKRPKITWKVLYLGFLSGLFGGSLFANLYGEGMVLTSTTFMFAMFNLTPGITFIMAIFFRLEKLNWSVVEGKAKMIGTLIGIGGAMIMTFYKGAKI 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01663 161 Pfam EamA-like transporter family 12 154 IPR000620 GO:0016020
Trre16g01663 161 PANTHER WAT1-RELATED PROTEIN 12 160 IPR030184 GO:0016020|GO:0022857
Trre16g01663 161 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01663 Trre-Chr16 13308394 13310882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01663 14 161 Nodulin-like Gene Family AT1G25270 43.243 5.46e-36 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01663 - - cam:101515687 225.328