Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01654 ATGTTGGAGTTACCATTCAATATGACACTTAGCATCCCTACATTGTATTTCGAGTTCTTACCTTTTGCTCAGAACTTGAAGCCTGAATTTCTGAATGGCGCAATTGCTCTTGTTGCTGTTGGCCTAACTGCTGCTTATATTTATTATCGCAAGAACCCTAAAGGTTGCCTGGACCCCAAAAATTTCAAAGAGTTTAAACTTGTAAAGAAGACTCAGATAAGCCCAAATGCTGCAAGATTCAAATTTGCACTTCCTACTCCTAAATCAATATTGGGTCTTCCTGTTGGAAAAAACATACTTGTGTTAGGAAGAGATAGTCAAGGAGAGGAAGTTATGAGATCATATACTCCAATCACATTGGATTCAGATATTGGCTATTTTGAATTAGTTGTGAAGATGTACCCAAATGGAAAAATGTCCCACCATTTTAGACAAATGAAGGAAGGTGACAACTTGGCCGTGAAGGGCCCCAAGGGACGATTCAGTTACAAACCTGGCCAAGTTAGGGCATTTGGAATGATTGCTGGAGGTTCAGGCATCACACCAATGTTTCAGGATATGAATTTGAATCTCTCATCTGAAGAAATCAAGAATATTAAAGATCTAATTGTGGTGGCCACAAATTTGCTTGATGAAAATAACAAGGACGTTGAAATAGTTGTTCTAGAGGATTATCTAAAGAAGCTCAAGGTCGACAAGGATGAAACAAATGCATTATAG 720 0.3833 MLELPFNMTLSIPTLYFEFLPFAQNLKPEFLNGAIALVAVGLTAAYIYYRKNPKGCLDPKNFKEFKLVKKTQISPNAARFKFALPTPKSILGLPVGKNILVLGRDSQGEEVMRSYTPITLDSDIGYFELVVKMYPNGKMSHHFRQMKEGDNLAVKGPKGRFSYKPGQVRAFGMIAGGSGITPMFQDMNLNLSSEEIKNIKDLIVVATNLLDENNKDVEIVVLEDYLKKLKVDKDETNAL 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01654 239 Pfam Oxidoreductase FAD-binding domain 65 163 IPR008333 -
Trre16g01654 239 PANTHER NADH-CYTOCHROME B5 REDUCTASE 50 193 IPR001834 GO:0016491
Trre16g01654 239 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 60 164 IPR017927 GO:0016491
Trre16g01654 239 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 152 192 IPR039261 -
Trre16g01654 239 CDD cyt_b5_reduct_like 65 185 - -
Trre16g01654 239 FunFam NADH-cytochrome b5 reductase 55 154 - -
Trre16g01654 239 Gene3D Translation factors 53 157 - -
Trre16g01654 239 PRINTS Cytochrome B5 reductase signature 91 102 - -
Trre16g01654 239 PRINTS Cytochrome B5 reductase signature 149 163 - -
Trre16g01654 239 PRINTS Cytochrome B5 reductase signature 172 191 - -
Trre16g01654 239 PRINTS Cytochrome B5 reductase signature 113 120 - -
Trre16g01654 239 SUPERFAMILY Riboflavin synthase domain-like 54 165 IPR017938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01654 Trre-Chr16 13227080 13230141 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01654 46 185 NADPH P450 reductases AT5G17770 66.429 5.62e-68 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01654 K00326 - gmx:100809584 315.849