Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01649 ATGCTAATAAGAGCCATAGTAGAAAACCCAAAGGACAAAACAAAGGTGTACCTCATTTACGCCAATGTGACAGTGGACGATATCCTACTAAAGGAAGAACTAGATCGCTTTGCAAACACATTTCCTCACAGATTCCATGTCTATCATGTTCTTAATAAGCCTCCAAATGAATGGAATGGTGGAGTTGGGTACATATCAAAGGAGATGATTGAATCCCATTGTCCAGCACCTTCCTCAGATATCCAGATACTCAGGTGTGGTCCACCACCTATGAATAAAGCCATAGGAACTCATCTTGCTGCACTTGGATACACATCAAACATGCAGTTTGAGTTCTAA 339 0.41 MLIRAIVENPKDKTKVYLIYANVTVDDILLKEELDRFANTFPHRFHVYHVLNKPPNEWNGGVGYISKEMIESHCPAPSSDIQILRCGPPPMNKAIGTHLAALGYTSNMQFEF 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01649 112 Pfam Oxidoreductase NAD-binding domain 3 95 IPR001433 GO:0016491
Trre16g01649 112 Gene3D - 1 112 IPR039261 -
Trre16g01649 112 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 2 108 IPR039261 -
Trre16g01649 112 FunFam NADH-cytochrome b5 reductase 1 112 - -
Trre16g01649 112 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 112 IPR001834 GO:0016491
Trre16g01649 112 CDD cyt_b5_reduct_like 2 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01649 Trre-Chr16 13209364 13211236 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01649 4 112 NADPH P450 reductases AT5G17770 67.890 3.56e-55 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01649 K00326 - gmx:100784114 199.519