Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01648 ATGCGGCGGTTAGAAACAATAGAGAGATGGTGGTCGGCGGTTAGGAACAAAACAGAGCTAATAAGAGCCATAGTAGAAAACCCAAAGGACAAAACAAAGGTGTACCTCATTTACGCCAATGTGACAGTGGACGATATCCTACTAAAGGAAGAACTAGATCGCTTTGCAAACACATTTCCTCACAGATTCCATGTCTATCATGTTCTTAATAAGCCTCCAAATGAATGGAATGGTGGAGTTGGGTACATATCAAAGGAGATGATTGAATCCCATTGTCCAGCACCTTCCTCAGATATCCAGATACTCAGGTGTGGTCCACCACCTATGAATAAAGCCATAGGAACTCATCTTGCTGCACTTGGATACACATCAAACATGCAGTTTGAGTTCTAA 393 0.4224 MRRLETIERWWSAVRNKTELIRAIVENPKDKTKVYLIYANVTVDDILLKEELDRFANTFPHRFHVYHVLNKPPNEWNGGVGYISKEMIESHCPAPSSDIQILRCGPPPMNKAIGTHLAALGYTSNMQFEF 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01648 130 Gene3D - 18 130 IPR039261 -
Trre16g01648 130 Pfam Oxidoreductase NAD-binding domain 20 113 IPR001433 GO:0016491
Trre16g01648 130 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 20 126 IPR039261 -
Trre16g01648 130 CDD cyt_b5_reduct_like 20 130 - -
Trre16g01648 130 PANTHER NADH-CYTOCHROME B5 REDUCTASE 19 130 IPR001834 GO:0016491
Trre16g01648 130 FunFam NADH-cytochrome b5 reductase 11 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01648 Trre-Chr16 13209364 13211581 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01648 12 130 NADPH P450 reductases AT5G17770 63.025 8.79e-56 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01648 K00326 - gmx:100784114 200.675