Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01631 ATGGGGTCTCAAGGTGGGGGAGATGGTAATGGAAAACGGTCACAACTCCACTCTCTTGTGCGGCAAAATTCGATGTACAGTCTCACACTTGATGAAGTTCAAAATCAATTAGGAGACTTAGGGAAGCCACTAAGTAGTATGAACTTAGACGAGCTTCTTAAAAATGTATGGACTGTTGAGGTGAACCAGTCCACGAGTACGGATAATGAAGGGAAAACACAAGCTAGTCAAGCTTCTCTACAACGTCAAGCTAGTCTGTCGTTAAAAGCTGCGTTAAGCATGAAGACTGTGGATGAGGTTTGGAGGGATATCCAACAAACGAAAGACAATGAGGAGAAGAAGTCACGCGAGAGACAACCTACTTTAGGAGAGATGACATTAGAGGATTTCTTGGTGAAAGCAGGTATTGTTGCAGAAGCATCTTCTGATAAAACCAATACCGATACTATAGCTGGGATTGATTCCAATGCAGCAGTATCACCGTTTCCTCCACAAGGTCAGTGGATACAGTATCCACAACCGCAACCACAACCACAATATCAGCATCTACAACAAAGTTCAATGGGGATTTATATGCCTAGCCAGGGTATCGCACAACCGTTACAATTGGGGGCTGGTGCTTCAATGGAGATTCCATTTGCAGATAGTCATATGGCACTGGCTGCACCACTTATGGGAACAGTGTTGGATACACAGATATCTGGAAGAAAAAGGAGCACTCCAGAGGATATGGTGGAGAAGACTGTTGAGAGAAGGCAGAAAAGGATGATCAAGAATCGGGAATCTGCTGCCCGTTCAAGAGCAAGGAAACAGGCTTACACAAACGAATTGGAGATTAAAGTTTCGCGCCTGGAAGAGGAAAATGAAATGCTGAGGAAACGAAAGGAGCTAGAGAATATGTTGCCGTGTGTACCAATCACCGAACCTAAATATCAGCTACGCCGAATCGCATCTTCTCCATTCTAA 966 0.4431 MGSQGGGDGNGKRSQLHSLVRQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTVEVNQSTSTDNEGKTQASQASLQRQASLSLKAALSMKTVDEVWRDIQQTKDNEEKKSRERQPTLGEMTLEDFLVKAGIVAEASSDKTNTDTIAGIDSNAAVSPFPPQGQWIQYPQPQPQPQYQHLQQSSMGIYMPSQGIAQPLQLGAGASMEIPFADSHMALAAPLMGTVLDTQISGRKRSTPEDMVEKTVERRQKRMIKNRESAARSRARKQAYTNELEIKVSRLEEENEMLRKRKELENMLPCVPITEPKYQLRRIASSPF 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01631 321 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 20 316 IPR043452 GO:0003700|GO:0045893
Trre16g01631 321 Coils Coil 267 301 - -
Trre16g01631 321 SMART brlzneu 247 319 IPR004827 GO:0003700|GO:0006355
Trre16g01631 321 MobiDBLite consensus disorder prediction 1 20 - -
Trre16g01631 321 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 249 301 - -
Trre16g01631 321 SUPERFAMILY Leucine zipper domain 251 296 IPR046347 GO:0003700|GO:0006355
Trre16g01631 321 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 254 269 IPR004827 GO:0003700|GO:0006355
Trre16g01631 321 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 249 294 IPR004827 GO:0003700|GO:0006355
Trre16g01631 321 CDD bZIP_plant_BZIP46 251 297 - -
Trre16g01631 321 Pfam bZIP transcription factor 251 295 IPR004827 GO:0003700|GO:0006355
Trre16g01631 321 Gene3D - 249 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01631 Trre-Chr16 13040399 13042584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01631 18 321 bZIP Transcription Factor Family AT3G56850 52.500 1.16e-91 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre16g01631 bZIP_1 2e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01631 K14432 - gmx:100101875 420.624