Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01611 ATGGAGTGGCTTCTTCAATTCCTTCATCTCTTCTTCTTAGCTTCTCTTCTTATCTGCAACACAACAATTGCAGATCAAATTACTAAGCCTTATGTTGTTTATATGGGAAATTCATCACCAAATAAAATTGGATTAGATGAACAAATACCAGAATCAGTTCATTTAGAGTTACTATCATCAATCATTCCAAGTGAAGAAAGTGAGAGGATAGAACTGATTCATCATTACAATCATGCCTTTAGTGGATTCTCTGCCATGCTTACAGAGAATGAAGCTTCTGCATTGTCTGGCCACGATGGTGTGGTGTCAGTGTTCCAAGATCCAATACTTGAATTGCATACAACGAGGTCTTGGGATTTCTTAGATTCAGATTTGGGAATGAAGCCTCCACCTGCCACTACTCATCAAATTTCATCAACTCATGATATAATCATTGCTCTCATTGACACCGGGATATGGCCAGAGTCACCAAGTTTCAAAGATGATGGTATAGGCAAGATTCCTTCAAAATGGAAAGGAGTTTGCATGGAGGGACATGATTTCAAGAAATCTAATTGCAACAGAAAATTGATAGGTGCAAGATACTATAATACACAAGATACATTAATTAGCAACAAGACTCATATTGAAGGAACAAAAGGTTCACCAAGAGATTCTATTGGACATGGAACTCACACTGCATCAACAGCAGCCGGTGTATTTGTCGACAATGCAAGTTATTTTGGTTTAGGAAAAGGAACAGCTAGAGGTGGTTCACCTTCTACTAGGATTGCTGCCTATAAAACATGTTCAGAAGATGGTTGTTCAGGTTCAACAATATTAAAGGCTATGGATGATGCTATTAAAGATGGTGTAGATATAATCTCAATCTCTATTGGACTTAGTTCACTGATGCAATCAGATTATTTGAATGATCCAATAGCTATTGGAGCATTTCATGCAGAACAAAGAGGGGTTATGGTTGTGTGTTCAGCTGGGAATGATGGTCCTGATCCTTATACTGTTGTGAATACGGCACCGTGGATATTTACTGTTGCAGCTTCTAATATTGATAGGAACTTTCAGTCAACTATTGTCCTTGGAAATGGGAAAAGTTTCAAAGGTACTGGAATTAACTTCTCAAACCTTACTCACTCAACATTGTATTCTCTTGTCTTTGGAGAGAAAGTTGCTGCCAAATTCGCGCCAATATCAGAAGCTAGGAACTGTTATCCTGGATCACTAGATTACAACAAAGTAGCAGGCAGAATTGTTGTTTGTGTTGACGATGATCCGAATATTTCAAGGAAAACCAAGAAGCTAGTTTTACAAGATGCAAGAGCCATGGGAATGATATTCGTCAGCGAGGACAATAAGGATGTTTCCTTTGATGCAGGTGCATTTCCCTTCACAGAGATTGGAAATCTTGAAGGGCGCCAAATCCTTCAGTATATAAACTCTACCAAGAAACCAACTGCAACAATTCTTCCAACAATAGAAGTTCCTAGATATCGGCCGGCACCAATTGTTGCCTCTTTCTCATCTAGAGGTCCTTCAAGCCTCACAGAAAACATTCTCAAGCCTGATGTCATGGCTCCAGGAGTCTCTATTTTGGCTGCCATGGTTCCTAAGAGTGATGAACCAGGAAGTGTTCCAATTGGGAAAAAGCCATCCTTATTTGGAATAAAATCTGGTACATCTATGGCTTGCCCTCATGTGACAGGTGCTGCAGCATTCATCAAATCAGTACATGGAAGTTGGAGTCCTTCAATGATCAAATCAGCATTGATGACAACAGCTACAACCTACAATAACATGAGGAAGCCAGTGACAAATAGCTCAAACTACATTGCCAACCCACACGAAATGGGAGTCGGAGAAATCAATCCACTCAAAGCTCTCAACCCTGGTTTAGTCTTCGAAACAGATATCGAAGACCACATTCGATTCCTTTGTTATTATGGCTATTCAAACAAAACCATAAGATCAGTGTCTAAGACTAATGTAACTTGCCCAAGAACCTCTCATGATCTTATATCCAACATCAATTATCCATCAATCTCTATACAAACACTTAAAAGAAATCAGAAAGTAAGAATAATCACAAGAACAGTGACCAATGTAGGAACCTTAAATGCTACATATGTTGCAAAAGTGCATGCACCTGAAGGATTGCTTGTTAAGGTCATTCCCAACAAACTTGTATTTTCAGAAAGTGTTCAAAGAATTACCTATAAAGTCTCATTCTATGCCAAGGAAGCTCATGGTGGATACAATTTTGGGTCTCTAACATGGCTTGATGGTCGACATTATGTTCATACAGTATATGCAGTCAAAGTTGAATAA 2325 0.3888 MEWLLQFLHLFFLASLLICNTTIADQITKPYVVYMGNSSPNKIGLDEQIPESVHLELLSSIIPSEESERIELIHHYNHAFSGFSAMLTENEASALSGHDGVVSVFQDPILELHTTRSWDFLDSDLGMKPPPATTHQISSTHDIIIALIDTGIWPESPSFKDDGIGKIPSKWKGVCMEGHDFKKSNCNRKLIGARYYNTQDTLISNKTHIEGTKGSPRDSIGHGTHTASTAAGVFVDNASYFGLGKGTARGGSPSTRIAAYKTCSEDGCSGSTILKAMDDAIKDGVDIISISIGLSSLMQSDYLNDPIAIGAFHAEQRGVMVVCSAGNDGPDPYTVVNTAPWIFTVAASNIDRNFQSTIVLGNGKSFKGTGINFSNLTHSTLYSLVFGEKVAAKFAPISEARNCYPGSLDYNKVAGRIVVCVDDDPNISRKTKKLVLQDARAMGMIFVSEDNKDVSFDAGAFPFTEIGNLEGRQILQYINSTKKPTATILPTIEVPRYRPAPIVASFSSRGPSSLTENILKPDVMAPGVSILAAMVPKSDEPGSVPIGKKPSLFGIKSGTSMACPHVTGAAAFIKSVHGSWSPSMIKSALMTTATTYNNMRKPVTNSSNYIANPHEMGVGEINPLKALNPGLVFETDIEDHIRFLCYYGYSNKTIRSVSKTNVTCPRTSHDLISNINYPSISIQTLKRNQKVRIITRTVTNVGTLNATYVAKVHAPEGLLVKVIPNKLVFSESVQRITYKVSFYAKEAHGGYNFGSLTWLDGRHYVHTVYAVKVE 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01611 774 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 766 IPR045051 -
Trre16g01611 774 ProSiteProfiles Serine proteases, subtilase domain profile. 117 627 - -
Trre16g01611 774 Gene3D Peptidase S8/S53 domain 142 639 IPR036852 GO:0004252|GO:0006508
Trre16g01611 774 Gene3D - 351 495 - -
Trre16g01611 774 Pfam Subtilase family 142 598 IPR000209 GO:0006508|GO:0008236
Trre16g01611 774 FunFam subtilisin-like protease SBT1.5 351 494 - -
Trre16g01611 774 SUPERFAMILY Subtilisin-like 113 631 IPR036852 GO:0004252|GO:0006508
Trre16g01611 774 CDD PA_subtilisin_like 357 488 - -
Trre16g01611 774 ProSitePatterns Serine proteases, subtilase family, serine active site. 558 568 IPR023828 -
Trre16g01611 774 PRINTS Subtilisin serine protease family (S8) signature 218 231 IPR015500 -
Trre16g01611 774 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Trre16g01611 774 PRINTS Subtilisin serine protease family (S8) signature 557 573 IPR015500 -
Trre16g01611 774 FunFam Subtilisin-like protease SBT1.5 142 370 - -
Trre16g01611 774 Gene3D - 644 773 - -
Trre16g01611 774 CDD Peptidases_S8_3 110 594 IPR034197 -
Trre16g01611 774 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 113 IPR037045 -
Trre16g01611 774 Pfam Peptidase inhibitor I9 31 113 IPR010259 -
Trre16g01611 774 Pfam Fibronectin type-III domain 674 769 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01611 Trre-Chr16 12891291 12899073 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01611 31 771 Subtilisin-like Serine Gene Family AT1G20150 44.079 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01611 K25898 - gmx:100809885 1240.33