LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre16g01609	ATGTTCAACATGATTTTACTCGTTAGGAGGCAGTTGTTTTTTGTATCTGGTCTGGTTCTTGATTTCTTAATACGCCTTCCACATATAACACCTTCTCCTGTCCATTGCCGTTCCCAGATAAACCTTCCGGAGATGGTGCTTTTCTGTGAAGATGATTCAGAGGATATTACTAGCTGGGTCATTCATGATGATGAATCTCGACGAAGATCTGATAGGTCAAGAAACGACCTTGAGATACAAGAGTATCATAGGAAGCACCCAGTTGCACGTGTTGCTGATGCTAATGACGATTTTGAAGCCCTGCTTAAAGAGGAACTTCAAATTGATATTGGATATAAGAAAGAGATTCTTCTAGAAAAACATTTGGTTAAGCGTGAAGATGTTTTCTGGCGAATCGGGTTGAAGAGAAACATAAAAAGCCAATCAAATGAAGCAGTTGATCATGAATACAAATACAATCCAAAGCACATATCGACATTGCAACCAAAGTCACAAGCCGAAACCGATAAATCCTCCGCGGAATTTGTTTCGCTTTGTAGAAGTAGCACTCCTGCTCCATCAGGTCAGAAGATTCCACTTTACAATGTGGCACATAGAAGAGCTGGAGATAAAGGAAATGACATAAATTTTTCTCTCATTCCACATTTTCCTCCTGATATTAAGAGGTTGAAACCAATTATCACATCTTAA	690	0.3913	MFNMILLVRRQLFFVSGLVLDFLIRLPHITPSPVHCRSQINLPEMVLFCEDDSEDITSWVIHDDESRRRSDRSRNDLEIQEYHRKHPVARVADANDDFEALLKEELQIDIGYKKEILLEKHLVKREDVFWRIGLKRNIKSQSNEAVDHEYKYNPKHISTLQPKSQAETDKSSAEFVSLCRSSTPAPSGQKIPLYNVAHRRAGDKGNDINFSLIPHFPPDIKRLKPIITS	229

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre16g01609	229	PANTHER	PROPIONYL-COA CARBOXYLASE	108	228	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre16g01609	Trre-Chr16	12881422	12885333	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre16g01609	78	105	C2H2 Transcription Factor Family	AT5G06160	64.286	5.75e-06	44.7

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre16g01609	-		-	gmx:100790647	171.4