Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01605 ATGAGTTCGAAATGGAATACATATAGTTCACTTGTGAGACTCTTTGGTAGTTTCTCCGAAGGCCCCAGACATCTTCCAAATAGTTTAAGAGTTTTGAAATGGCAAGGATATCCTTTACCATCTTTACCTCATTATTTCAATCCAATGAAACTTTCCATACTTGAGTTACCTGACAGCTGCTTAAAGCCATGCAAACCAATCCAGGTATTTGCACAATTGAGAATTTTGGATTTTAGTAGCAGTGAATCTGTAACTGAGATACCTGATGTATCTGGTGCCCGAAATTTAGAAAAATTGTCATTTAGAGATTGTGAGAATTTAACTAAAGTTCATCACTCAGTTGGACATCTGAAAAATCTTAAGATATTGGATGCTTCTGGTTGCAAGAATCTGAAGACTTTTCCACCCATCATATTAGAATCTCTTGAACAACTCAATCTTTCAAATTGTTCAATTCTTGAGAATTTCCCTGAAATATCTGAGAAGATGAATAAAATAACAGAGATTCATATAAGCGGGAGTCCTATAAGAGAATATCCATTTTCAATTAAAAACCTTACCCGGCTTCGAAATTTGGAACTGGAAAAGTGTGGAATGGTTCGGTTACCTAGTAGCATTTTTGTGTTACCTGAACTAAGTGTGATGCATCTTTCAGAATGCGAAGGGCTAAGCTTACGTGAACAAGACAATGGTATAAAAATGGTGTTGAAGTCTTCATCAAATGTGGATTATCTTGTTCTATCAAATTGCAATATATCCGATGACTTCTTTCAAATTGGTCTTAAATTTTTATCCAATGAGAAAGATTTAAACCTATCGGGGAATAATTTCAAAACTCTTCATGCGTGGATCAAAGAATGTCATCTTTTGAGGAACCTTAAGATGGATTATTGCAGGCATCTTCAAGAAATTAGAGGGATTCCGAGGAAATTAGAAAACATTTCTGTAAAAGGATGCATATCCTTGAAATGCGTAGACCTCACAGTTCTTCCTGAATGCACCGAAGAATGTTGCTCTCTAAAGGAACTGATTTTGGATGACTGTGCAGGTCTTCAAATGATTACTGGGCTTCCACCAAACTTGGATAGTTTCTCTGCAAAAGGTTGCACATCCTTGAATACCCAGACTTTAAACATGCTATGTAATCAGGAACGGGTAGAAGCTGGAAACAAGTTATTTTTTCCGGGGAAAAAAATTCCAAAGTGGTTCATGCATCGTAGAAGGGGAGGGTCAATGTCTTTCTGGTTTCAGAAAAAATTCCCTTCGATTTCTCTTTGTCTTGTTATAGGATGTGGGGATGAGAAAGTTATCAAGGTCAAATTTAGCCTTCGAGTATTCATCAATAAAAATATACAGTTGCTTGGCTGTCAGAAAATCTACGAGTTCATGATAGCAACTGATCATGTGCTTTTGCTAAAGTTTGAAGATAATGAGGACATAGTGTTTTCAGATGATGAGTGGAATCACGTGGAGGTGTCATATGCAGATCATATAACCAACAAAGAGGTCTCTATCAGAGATGTTGCTAGCTTTAGCGGAATCCATGTATTATATGAACAGACATGTCCGAGGAATGTCCAATTCTGTCCTCCAGAGACAATTATAAGTGTGAATTTTAAATCAAATTCAATGGAGATGTCACCGCAGAAAAGCGTCAAGATGGTAACAGAGAGATCTCAGAACGATCAGACTATGGTGTTATCTTCATCCATTCTCACATCGACCCAACCTCCACCTACTGATGCAGAAAAGAGCCCAGCCCTTCAACCAATGCGGTCATTTAAGCCGTTGGAGAATGTCATAGGAGAAACTTCAAAAAGTGTTAGAGAGGATGAACAAGTGTATGCTGTTACAATTCAAAATGGCCTTCCTCTCATTGGAAGACGTCACGAGGGTAATCATGCCAAATTGGAATCAGTAACCGCTTGGGAACATCAATCTGAAGAGTCTTCTTTCAACACTAAAGGTTCTGACTCGGATGAACCCTTTGACCTTGATGGTAGAAAATTATCTGTTAATGGCCTGGTAGCCGTGTCCCCTAGGGAGAAATCTCAAGGGTCTTCTTTCAACACTAACGGTTTTCACTCAGATTGTCCCATCAACTTAGTTGATAGAAAGCTCTCTGTTAATGGCCATGCAATCATATCTTCTGGGGATGCTTCTCTTGTATCAATTAGAGAGGCTATCAATTCCTTGGAGCTGTTAATGTTTAAGGACTTATCTGAAGTCTCTTCTGATCCCGCTATACAGTCTGGACTTAATCGGCTTTTGGATGTATTGAGTATAAAGACAGTTGAAGTTCAAAAGGCTATTGGAGAGTTCAAAACAAAAGCATTTGCATCATGCCAAGAATTCCAATCTACTGTTGAGTCTTTGAACAAACTGAAGAGTTATGAGAAGCGTCTAGATGGAATTCGGCAGGAGACTGCTGCAAGCAAGGGTCAATGGAGTGCACTCGAAAACTCAATAGAAAATATTTCTTCGGCCATCGATGATGAAAATAGGAGGAAGAATGAGCTAGAAGAAGAAATTGCTACTTTGAAGGAACAGCAAGATGCCAAAGGAAGAGACCTAGAACAACTTGTGTTGAATCTCAAGAATAAGGAAGCAACACTCTCAACATATTCAACCAATTGCGCTTCTCTCAACGAGCAAGCTCAAAAGCTATTAGAAGAAGCTGGTTATCTACTTGCTGCAAGGAGTGAGATAGAGGATGAGGGTGAAGGTGAAGCCCCTGAAGTAAAGCAGAACAGGCTCAAGTCAACATGGTCTTCTGACATAACTCCACATTTTAGTAAAATTAAACATTACATTTTTGGTCTAGATGACTAA 2832 0.3863 MSSKWNTYSSLVRLFGSFSEGPRHLPNSLRVLKWQGYPLPSLPHYFNPMKLSILELPDSCLKPCKPIQVFAQLRILDFSSSESVTEIPDVSGARNLEKLSFRDCENLTKVHHSVGHLKNLKILDASGCKNLKTFPPIILESLEQLNLSNCSILENFPEISEKMNKITEIHISGSPIREYPFSIKNLTRLRNLELEKCGMVRLPSSIFVLPELSVMHLSECEGLSLREQDNGIKMVLKSSSNVDYLVLSNCNISDDFFQIGLKFLSNEKDLNLSGNNFKTLHAWIKECHLLRNLKMDYCRHLQEIRGIPRKLENISVKGCISLKCVDLTVLPECTEECCSLKELILDDCAGLQMITGLPPNLDSFSAKGCTSLNTQTLNMLCNQERVEAGNKLFFPGKKIPKWFMHRRRGGSMSFWFQKKFPSISLCLVIGCGDEKVIKVKFSLRVFINKNIQLLGCQKIYEFMIATDHVLLLKFEDNEDIVFSDDEWNHVEVSYADHITNKEVSIRDVASFSGIHVLYEQTCPRNVQFCPPETIISVNFKSNSMEMSPQKSVKMVTERSQNDQTMVLSSSILTSTQPPPTDAEKSPALQPMRSFKPLENVIGETSKSVREDEQVYAVTIQNGLPLIGRRHEGNHAKLESVTAWEHQSEESSFNTKGSDSDEPFDLDGRKLSVNGLVAVSPREKSQGSSFNTNGFHSDCPINLVDRKLSVNGHAIISSGDASLVSIREAINSLELLMFKDLSEVSSDPAIQSGLNRLLDVLSIKTVEVQKAIGEFKTKAFASCQEFQSTVESLNKLKSYEKRLDGIRQETAASKGQWSALENSIENISSAIDDENRRKNELEEEIATLKEQQDAKGRDLEQLVLNLKNKEATLSTYSTNCASLNEQAQKLLEEAGYLLAARSEIEDEGEGEAPEVKQNRLKSTWSSDITPHFSKIKHYIFGLDD 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01605 943 Gene3D Ribonuclease Inhibitor 142 388 IPR032675 -
Trre16g01605 943 Gene3D Ribonuclease Inhibitor 4 141 IPR032675 -
Trre16g01605 943 MobiDBLite consensus disorder prediction 644 664 - -
Trre16g01605 943 MobiDBLite consensus disorder prediction 644 658 - -
Trre16g01605 943 Coils Coil 823 857 - -
Trre16g01605 943 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 23 164 - -
Trre16g01605 943 Coils Coil 865 892 - -
Trre16g01605 943 Pfam C-JID domain 394 520 IPR045344 -
Trre16g01605 943 SUPERFAMILY L domain-like 17 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01605 Trre-Chr16 12860674 12864089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01605 17 220 WRKY Transcription Factor Family AT4G12020 41.395 1.21e-33 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01605 - - mtr:25501119 1301.19