Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01601 ATGGAAGAAATTGAAAACACCAATGACTATTTATTAGGCATACTTCTGCAATCAAATCTTGCCGAAAAACAAGGACATGGAAATAGGTTAATTCAACTTAAAATTGTAACCATGATTTTGTACGAGGTACTAAGGTTATATCCACCTGTACTTTACTTCAACCGAGTTCTTCGAAAGGATATGAAAGTTGGAAACGTTTTGCTGACCGCAGGAACACAAGTATCCCTACCAATAATTTTGATTCACCAAGATAATGATATATGGGGTGATGATGCAAAGGAGTTCAAACCTGAAAGGTTTGCTGAAGGGATTGCAAAGGCAACAAAAGGCCAAAATTTCTCATTTGAGCTTTCTCCTAATTATGCACATGTTCCTAACATGATGCTTACTTTGCAGCCAAAAAATGGGGCAACCATCATTTTGCATAAATTGTAG 435 0.3655 MEEIENTNDYLLGILLQSNLAEKQGHGNRLIQLKIVTMILYEVLRLYPPVLYFNRVLRKDMKVGNVLLTAGTQVSLPIILIHQDNDIWGDDAKEFKPERFAEGIAKATKGQNFSFELSPNYAHVPNMMLTLQPKNGATIILHKL 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01601 144 PANTHER CYTOCHROME P450 FAMILY MEMBER 28 107 - -
Trre16g01601 144 SUPERFAMILY Cytochrome P450 30 142 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01601 144 Gene3D Cytochrome P450 16 143 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01601 144 Pfam Cytochrome P450 30 105 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01601 Trre-Chr16 12820558 12821513 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01601 20 144 Cytochrome P450 AT3G14680 45.860 9.27e-42 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01601 - K17873 ag:BAL45207 168.318