Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01600 ATGCGGTCCACCGTAAGAGTAAACAACACACAAAAGCTTGTTTTTTATGCAGGAAAAAATTCCTTTCTATGGGTAGGTACAACACCAAATGTTATCATCACAGATCCTGAACAAATTAAGCAAGTCTTTAACAAGAATGAGGACTTCCCCAAACCAAAGCTAACATCCATTGGCAAGTATTTGAGCAATGGTCTTATAAATTATGAGGGTGAGAAATGGGCTAAACATCGAAAGATCGTCAATCCGGCATTTCACATAGAAAAATTGAAAGGTATGCTGCCTGCATTTTTTCATAGTTGCAATGAAATGATAAGCAAATGGAAGGGATTGTTGTCACCAGATGGAACATGTGAAATTGATGTTTGGCCTTTCCTTCAGAATTTGACCTGTGATGCAATTTCTAGAACAGCATTTGGAAGTAGCTATGAAGAAGGCACAAAAATATTTGAACTTCTAAAAAAGCAAGGATATCTTGTGATGACAGCACGACACACGAATATTCCATTATGGCGACTTCTACCAACATCTACCAAGAGGAAGATGAAAGAAATTGAAAGAGAAATCCAATCATTACAAAACGAGAAAATGCAATGA 594 0.3687 MRSTVRVNNTQKLVFYAGKNSFLWVGTTPNVIITDPEQIKQVFNKNEDFPKPKLTSIGKYLSNGLINYEGEKWAKHRKIVNPAFHIEKLKGMLPAFFHSCNEMISKWKGLLSPDGTCEIDVWPFLQNLTCDAISRTAFGSSYEEGTKIFELLKKQGYLVMTARHTNIPLWRLLPTSTKRKMKEIEREIQSLQNEKMQ 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01600 197 PANTHER CYTOCHROME P450 FAMILY MEMBER 19 193 - -
Trre16g01600 197 Coils Coil 181 197 - -
Trre16g01600 197 Pfam Cytochrome P450 18 196 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01600 197 PRINTS Group II E-class P450 signature 127 145 IPR002402 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01600 197 PRINTS Group II E-class P450 signature 70 90 IPR002402 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01600 197 SUPERFAMILY Cytochrome P450 12 194 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01600 197 Gene3D Cytochrome P450 8 197 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01600 Trre-Chr16 12804156 12806393 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01600 11 194 Cytochrome P450 AT3G14620 52.688 1.43e-62 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01600 - K17873 ag:BAL45207 295.049