Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01598 ATGACCACAAAAGAAGTGATAGATGAATGCAAATTGTTTTACTTGGCAGGGCAAGAAACTACCTCAAGTTGGCTGGTTTGGACAATGGTGTTATTAGGCAGGTTTCCTGAATGGCAAGCACGCGCAAGGAGCGAAGTTTTGCAAGTTTTTGGGAACCAAAATCCAAACTTTGAAGGATTAAGTCAACTTAAAATTGTAACCATGATTTTGTACGAGGTACTAAGGTTATATCCACCTGTACTTTACTTCAACCGAGTTCTTCGAAAGGATATGAAAGTTGGAAACGTTTTGCTGCCCGCAGGAACACAAGTATCCCTACCAATAATTTTGATTCACCAAGATAATGATATATGGGGTGATGATGCAAAGGAGTTCAAACCTGAAAGGTTTGCTGAAGGAATTGCAAAGGCAACAAAAGGCCAAATTTGTTATTTCCCTTTTGGATGGGGTCCTACAATTTGTCATGGACAAAACTTTGCCATATTAGAAGCAAAGATAGTAATATCATTGTTGCTGAAGAATTTCTCATTTGAGCTTTCTCCTAATTATGAACATGTTCCTAGCATGATGCTTACTTTGAAGCCAAAAAATGGGGCAAGCATCATTTTGCATAAATTGTAA 621 0.38 MTTKEVIDECKLFYLAGQETTSSWLVWTMVLLGRFPEWQARARSEVLQVFGNQNPNFEGLSQLKIVTMILYEVLRLYPPVLYFNRVLRKDMKVGNVLLPAGTQVSLPIILIHQDNDIWGDDAKEFKPERFAEGIAKATKGQICYFPFGWGPTICHGQNFAILEAKIVISLLLKNFSFELSPNYEHVPSMMLTLKPKNGASIILHKL 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01598 206 PRINTS E-class P450 group I signature 144 154 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01598 206 PRINTS E-class P450 group I signature 108 132 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01598 206 PRINTS E-class P450 group I signature 154 177 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01598 206 PRINTS E-class P450 group I signature 25 51 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01598 206 PRINTS E-class P450 group I signature 5 22 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01598 206 PRINTS P450 superfamily signature 68 79 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01598 206 PRINTS P450 superfamily signature 154 165 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01598 206 PRINTS P450 superfamily signature 16 33 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01598 206 PRINTS P450 superfamily signature 145 154 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01598 206 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 198 - -
Trre16g01598 206 SUPERFAMILY Cytochrome P450 1 204 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01598 206 Gene3D Cytochrome P450 1 206 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01598 206 Pfam Cytochrome P450 1 197 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01598 Trre-Chr16 12803288 12804060 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01598 1 206 Cytochrome P450 AT3G14680 61.650 5.55e-97 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01598 - K17873 ag:BAL45207 348.206