Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01593 ATGGAGTTTGTGTTTTCAACAGAAACAACAATAATGATATGTGTTCTGACAGTTATACTTGCTGTGATTCCATTGCATCTGTTCAACAATTTGTGGTTGAAGCCAAAGAGGTTGGAAAAACTTCTAATATCTCAAGGTCTTCAAGGTGACCCATATAAGCTTTCACTATTAATGGATAATTCAAAGCAAATTTATATGATGAAGTTGCAACAAGAAGCTAAATCTAAATCCATTGGTCTTTCCAAACAAGCTGCACCGTCTATCTTCTCACCTTCTCATCAATCGGTAGAGAAATATGGAAAAAATTCCTTTCTATGGGTAGGTACAACACCAAATGTTATCATCACAGATCCTGAACAAATTAAGCAAGTCTTTAACAAGAATGAGGACTTCCCCAAACCAAAGCTAACATCCATTGGCAAGTATTTGAGCAATGGTCTTATAAATTATGAGGGTGAGAAATGGGCTAAACATCGAAAGATCGTCAATCCGGCATTTCACATAGAAAAATTGAAAGGTATGCTGCCTGCATTTTTTCATAGTTGCAATGAAATGATAAGCAAATGGAAGGGATTGTTGTCACCAGATGGAACATGTGAAATTGATGTTTGGCCTTTCCTTCAGAATTTGACCTGTGATGCAATTTCTAGAACAGCATTTGGAAGTAGCTATGAAGAAGGCACAAAAATATTTGAACTTCTAAAAAAGCAAGGATATCTTGTGATGACAGCACGACACACGAATATTCCATTATGGCGACTTCTACCAACATCTACCAAGAGGAAGATGAAAGAAATTGAAAGAGAAATCCAATCATTACAAAACGAGAAAATGCAATGA 840 0.3607 MEFVFSTETTIMICVLTVILAVIPLHLFNNLWLKPKRLEKLLISQGLQGDPYKLSLLMDNSKQIYMMKLQQEAKSKSIGLSKQAAPSIFSPSHQSVEKYGKNSFLWVGTTPNVIITDPEQIKQVFNKNEDFPKPKLTSIGKYLSNGLINYEGEKWAKHRKIVNPAFHIEKLKGMLPAFFHSCNEMISKWKGLLSPDGTCEIDVWPFLQNLTCDAISRTAFGSSYEEGTKIFELLKKQGYLVMTARHTNIPLWRLLPTSTKRKMKEIEREIQSLQNEKMQ 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01593 279 Gene3D Cytochrome P450 71 279 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01593 279 SUPERFAMILY Cytochrome P450 92 275 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01593 279 Coils Coil 263 279 - -
Trre16g01593 279 PRINTS Group II E-class P450 signature 209 227 IPR002402 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01593 279 PRINTS Group II E-class P450 signature 152 172 IPR002402 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01593 279 PANTHER CYTOCHROME P450 FAMILY MEMBER 21 275 - -
Trre16g01593 279 Pfam Cytochrome P450 93 278 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01593 Trre-Chr16 12731994 12735086 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01593 8 273 Cytochrome P450 AT3G14690 45.387 7.51e-76 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01593 - K17873 ag:BAL45207 404.445