Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01592 ATGACCACAAAAGAAGTGATAGATGAATGCAAATTGTTTTACTTGGCAGGGCAAGAAACTACCTCAAGTTGGCTGGTTTGGACAATGGTGTTATTAGGCAGGTTTCCTGAATGGCAAGCACGCGCAAGGCGCGAAGTTTTGCATGTTTTTGGGAACCAAAATCCAAACTTTGAAGGATTAAGTCAACTTAAAATTGTAACCATGATTTTGTACGAGGTACTAAGGTTATATCCACCTGTACTTTACTTCAACCGAGTTCTTCGAAAGGATATGAAAGTTGGAAACGTTTTGCTGCCCGCAGGAACACAAGTATCCCTACCAATAATTTTGATTCACCAAGATAATGATATATGGGGTGATGATGCAAAGGAGTTCAAACCTGAAAGGTTTGCTGAAGGGATTGCAAAGGCAACAAAAGGCCAAGTTTGTTATTTCCCTTTTGGATGGGGTCCTAGAATTTGTCTTGGACAAAATTTTGCCTTATTAGAAGCAAAAATAGTGATATCATTGTTGCTGAAGAATTTCTCATTTGAGCTTTCTCCTAATTATGCACATGTTCCTAGCATGATGCTTACTTTGAAGCCAAAAAATGGGGCAAGCATCATTTTGCATAAATTGTAA 621 0.3849 MTTKEVIDECKLFYLAGQETTSSWLVWTMVLLGRFPEWQARARREVLHVFGNQNPNFEGLSQLKIVTMILYEVLRLYPPVLYFNRVLRKDMKVGNVLLPAGTQVSLPIILIHQDNDIWGDDAKEFKPERFAEGIAKATKGQVCYFPFGWGPRICLGQNFALLEAKIVISLLLKNFSFELSPNYAHVPSMMLTLKPKNGASIILHKL 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01592 206 PRINTS P450 superfamily signature 68 79 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01592 206 PRINTS P450 superfamily signature 145 154 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01592 206 PRINTS P450 superfamily signature 154 165 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01592 206 PRINTS P450 superfamily signature 16 33 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01592 206 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 198 - -
Trre16g01592 206 SUPERFAMILY Cytochrome P450 1 204 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01592 206 Gene3D Cytochrome P450 1 206 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01592 206 PRINTS E-class P450 group I signature 144 154 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01592 206 PRINTS E-class P450 group I signature 108 132 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01592 206 PRINTS E-class P450 group I signature 5 22 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01592 206 PRINTS E-class P450 group I signature 25 51 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01592 206 PRINTS E-class P450 group I signature 154 177 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01592 206 Pfam Cytochrome P450 1 197 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01592 206 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 147 156 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01592 Trre-Chr16 12731126 12731898 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01592 1 206 Cytochrome P450 AT3G14680 62.621 5.64e-99 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01592 - K17873 ag:BAL45207 353.599