Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01590 ATGGAGTTTGTTCAACAAGTTATGGTTGAAGCCAAAGAGGTTGGAAAAACATCTCATATCTCAAGGTCTTCAAGGTGTGACTCATATAAGCTTTCACTATTAATGGATAACTCAAAGCAAATTCATATGATGAAGTTGCAACAAGAAGCTAAATCAAAGTCAATTGGTCTTTCCAAACAAGCTGCACCATCTATTTTCTCACTTGTTCATCAAACTGTTCATAAACATGGAAAGAGTTCCTTTTTTTGGGTAGGTACAAAACCAAGTGTTATCATCACAGACCCTGCACAAATTAAGCAAGTTTTTAACAAGAATGAGGACTTCCTCAAACCCAAGATAAGATCCATTGCCAAGTATTTCAGCATTGGTCTTCCACATCATGAGGGTGAAAAATGGGCTAAACATAGAAAGATCATCAATCCGGCATTCCATGTAGAAAAATTGAAAGTGATGCTGCCTGCATTTTTTCACAGTTGCAATGAAATGATAAGCAAATGGAAGGCATTGCTTTCATCAGATGGAACATGTGAGATTGATGTTTGTCCTTTCCTTCAGAATTTAAGCTGTGATGTAATTTCTAGAACAGCATTTGGAAGCAGCTATGAAGAAGGCACAAAAATATTTGAACTTCTGAAGAAGCAAGGATATCTTTTGATGACAGCACGACACACGAACATTCCATTATGGCGGCTTCTACCAACAACTACCAAGAGGAAGATGGAAGAAATTGAAACAGAAATCCATGATTCACTTGAGGGAATCATTAAAAAACGAGAAAAAGCATTGGAGAACGGTGAAAACACCAATGACGATTTATTAGGCATACTTCTGCAATCAAATCTTGCCGAAAAACAAGGACATGGAAATAGTAAGAGTATTGGAATGACAACCCAAGAAGTGATAGAAGAATGCAAATTGTTTTACGTGGCGGGGCAAGAGACCACCTCAAGTTTTCTGGTTTGGACAATGGTGTTATTAGGCAGGTATCCTGAATGGCAAGAACGTGCAAGACAGGAAGTTTTACAAGTTTTTGGGAACCAAACTCCAAACTTTGAAGGGTTAAGTCAACTTAAAATTGTAACCATGATTTTGTATGAGGTACTAAGGTTATATCCACCTGTACTTTACTTCAACCGAGCCATTCGAAAGGATATGCAAGTTGGAAACCTTTTTCTGCCCGCAGGAACACAAGTATCCCTACCGATAGTTTTGATTCACCATGATAATGATATATGGGGTGATGATGCAAAGGAGTTCAAACCTGAAAGGTTTGCTGAAGGGATTGCAAAGGCAACAAAAGGCCAAGTTTGTTATTTCCCTTTTGGATGGGGTCCTAGAATTTGTCTTGGACAAAACTTTGCCTTGTTAGAAGCAAAAATAGTGATATCATTGTTGCTGCAGAATTTCTCATTTGAGCTTTCTCCTACTTATGCACATGTTCCTAACATGATGCTTACTTTGCAGCCAAAAAATGGGGCAAGCATCATTTTGCATAAATTGTAA 1503 0.3799 MEFVQQVMVEAKEVGKTSHISRSSRCDSYKLSLLMDNSKQIHMMKLQQEAKSKSIGLSKQAAPSIFSLVHQTVHKHGKSSFFWVGTKPSVIITDPAQIKQVFNKNEDFLKPKIRSIAKYFSIGLPHHEGEKWAKHRKIINPAFHVEKLKVMLPAFFHSCNEMISKWKALLSSDGTCEIDVCPFLQNLSCDVISRTAFGSSYEEGTKIFELLKKQGYLLMTARHTNIPLWRLLPTTTKRKMEEIETEIHDSLEGIIKKREKALENGENTNDDLLGILLQSNLAEKQGHGNSKSIGMTTQEVIEECKLFYVAGQETTSSFLVWTMVLLGRYPEWQERARQEVLQVFGNQTPNFEGLSQLKIVTMILYEVLRLYPPVLYFNRAIRKDMQVGNLFLPAGTQVSLPIVLIHHDNDIWGDDAKEFKPERFAEGIAKATKGQVCYFPFGWGPRICLGQNFALLEAKIVISLLLQNFSFELSPTYAHVPNMMLTLQPKNGASIILHKL 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01590 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Trre16g01590 500 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01590 500 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01590 500 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01590 500 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01590 500 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01590 500 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01590 500 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01590 500 Pfam Cytochrome P450 63 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01590 500 CDD CYP72 66 496 - -
Trre16g01590 500 PANTHER CYTOCHROME P450 FAMILY MEMBER 33 492 - -
Trre16g01590 500 Gene3D Cytochrome P450 54 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01590 500 SUPERFAMILY Cytochrome P450 64 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01590 500 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01590 500 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01590 500 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01590 500 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01590 Trre-Chr16 12714127 12717025 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01590 19 500 Cytochrome P450 AT3G14690 51.033 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01590 - K17873 ag:BAL45207 760.755