Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01589 ATGGAGGAGTTTGTGTTTCCAACAGCAACAACAATAATCATATGTGTTCTTACAGTTATACTTGCTGTGATTCCATTGCATCTGTTCAACAAGTTATGGTTGAAGCCAAAGAGGTTGGAAAAACTTCTCATATCTCAAGGTCTTCAAGGTGACACATATAAGCTTTCACTATTAATGGATAATTCAAAGCAAATTCATATGATGAAGTTGCAACAAGAAGCTAAATCAAAGTCAATTGGTCTTTCCAAACAAGCTACACCATCTATTTTCTCACTTGCTCATCATACTGTTCATAAATATGGAAAGAATTCCTTTTTATGGGCAGGTACAACACCAAATGTTATCATCACAGATCCTGAGCAAATTAAGCAAGTCTTTAACAAGATTGAGGACTTTCCCAAACCAAAGCTAAGTTCCATTGCCAAGTATATGAGCATTGGTCTTTTAAATCATGAGGGTGAGAAATGGGCTAAACATCGAAAGATCATCAGTCCGGCGTTCAACATTGAAAAATTGAAAGTGATGCTGCCTGCATATTTTCACAGTTGCAATGAAATGATAGGCAAATGGAAAGGGTTGGTGTCACTAGATGGAACATGTGAGATTGATGTTTGGCCTTTTCTTCAGAATATGACTTGTGATGCAATTTCAAGAACAGCATTTGGAAGCAGCTATGCAGAAGGCACAAAAATGTTTGAACTTCTGAAGAAGCAAGGATATATTTTGATGACAGCACGACATACGAACATTCCATTATGGCGGCTTCTACCAACAACTACCAAGAGGAAGATGGAAGAACTTGAAACAAAAATCCAAGATTCACTTGAGGGAATCATTAAAAAACGAGAAAATGCATTGAAGAACGGTGAAAATACCGATGACGATTTATTAGGCATACTTTTGCAATCAAATTATGCCGAACAACAAGGACATGGAAATAGTAAAAGCCGGTATCCTGAATGGCAAGCACGCGCAAGGCAGGAAGTTTTGCAAGTTTTTGGGAACCAAAATCCAACCTTTGAAGGATTAAGTCAACTTAAAATTGTAACCATGATTTTGTATGAGGTACTAAGGTTATATCCACCCGGAGTTTACCTCAACCGAGCTGTTCGAAAGGATTTGAAAGTTGGAAACCTTTTTCTGCCCGCAGGAACACAAATTTCCCTACCGATAATTTTGATTCACCAAGATAATGATTTATGGGGTGATGATGCAAAGGAGTTCAAACCTGAAAGGTTTGCTGAAGGAATTGCAAAGGCAACAAAAGGCCAAGTTTGTTATTTCCCTTTTGGATGGGGTCCTAGAATTTGTGTTGGACAAAACTTTGCCTTATTAGAAGCAAAAATAGTGATATCATTGTTGCTGCAAAATTTCTCATTTGAGCTTTCTCCTACTTATGCTCATGTTCCTAACATGATGCTTACTTTGCAGCCAAAAAATGGGGCAAACATCATTTTGCATAAATTGTAA 1470 0.3748 MEEFVFPTATTIIICVLTVILAVIPLHLFNKLWLKPKRLEKLLISQGLQGDTYKLSLLMDNSKQIHMMKLQQEAKSKSIGLSKQATPSIFSLAHHTVHKYGKNSFLWAGTTPNVIITDPEQIKQVFNKIEDFPKPKLSSIAKYMSIGLLNHEGEKWAKHRKIISPAFNIEKLKVMLPAYFHSCNEMIGKWKGLVSLDGTCEIDVWPFLQNMTCDAISRTAFGSSYAEGTKMFELLKKQGYILMTARHTNIPLWRLLPTTTKRKMEELETKIQDSLEGIIKKRENALKNGENTDDDLLGILLQSNYAEQQGHGNSKSRYPEWQARARQEVLQVFGNQNPTFEGLSQLKIVTMILYEVLRLYPPGVYLNRAVRKDLKVGNLFLPAGTQISLPIILIHQDNDLWGDDAKEFKPERFAEGIAKATKGQVCYFPFGWGPRICVGQNFALLEAKIVISLLLQNFSFELSPTYAHVPNMMLTLQPKNGANIILHKL 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01589 489 PRINTS E-class P450 group I signature 97 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01589 489 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01589 489 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01589 489 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01589 489 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01589 489 Gene3D Cytochrome P450 66 315 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01589 489 Gene3D Cytochrome P450 316 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01589 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Trre16g01589 489 SUPERFAMILY Cytochrome P450 87 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01589 489 PANTHER CYTOCHROME P450 FAMILY MEMBER 22 481 - -
Trre16g01589 489 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01589 489 PRINTS P450 superfamily signature 317 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01589 489 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01589 489 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01589 489 Pfam Cytochrome P450 317 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01589 489 Pfam Cytochrome P450 88 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01589 Trre-Chr16 12705363 12709379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01589 11 489 Cytochrome P450 AT3G14690 47.563 6.40e-168 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01589 - K17873 ag:BAL45207 748.043