Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01419 ATGGTTGATCAAGTTCAGCGCCCTAGACTCATTGAGAATGTTGCACGCCAGACCGGTCTTTCTATGTACCAAAGCAGGTCATTTGGAAATTACTCCAACCCTGCATTTCAGTATCCAATGATGCCGGCATGTAGATCAACAGCGACCGAATTTTCTACTATTGCAACAACAGCTTCCCCTATCTTTGTTGCAGCTCCTGCTGAGAAAGGAAACTTTCTTGTCGACTTTCTCATGGGAGGAGTTTCAGCTGCTGTGTCTAAAACCGCTGCTGCTCCTATTGAACGGATTAAGCTATTGATCCAGAACCAAGATGAGATGATTAAAGCTGGTAGACTTTCTGAGCCCTATAAGGGAATTGGTGACTGTTTTAAGCGAACAATGGCTGATGAAGGTGTTGTTTCCCTGTGGAGAGGTAACACCGCAAATGTCATCCGTTATTTCCCCACTCAGGCTTTGAACTTTGCATTCAAGGACTACTTCAAGAGGCTTTTCAACTTCAAGAAGGACAAGGATGGTTACTGGAAATGGTTTGCTGGTAACTTGGCCTCAGGAGGTGCTGCTGGTGCTTCATCACTTTTCTTTGTCTACTCCCTCGACTATGCTCGTACCCGTCTGGCAAATGATGCAAAGGCTGCAAAGAAAGGTGGAGGCGGAAGACAATTCAACGGTCTTATTGATGTCTACAAGAAGACATTGGCAACTGATGGTATTGCTGGACTTTACCGTGGTTTCAACATTTCATGTGTTGGAATCATTGTGTATCGTGGTCTCTACTTCGGAATGTATGATTCCTTGAAGCCAGTTCTCCTAACTGGATCTTTGCAGGATAGTTTCTTTGCTAGTTTTGGACTTGGATGGCTCATCACCAATGGTGCAGGTCTTGCATCTTACCCAATTGACACTGTCAGAAGAAGAATGATGATGACATCTGGTGAAGCAGTCAAGTACAAGAGCTCCTTGGATGCATTCAACCAAATCCTCAAGAATGAGGGTGCTAAGTCATTGTTTAAGGGAGCTGGTGCTAACATTCTCCGTGCTGTCGCTGGTGCTGGTGTGCTCGCTGGTTATGACAAGTTACAGGTCATTATGCTCGGCAAGAAGTACGGATCTGGTGGTGCTTAA 1122 0.4519 MVDQVQRPRLIENVARQTGLSMYQSRSFGNYSNPAFQYPMMPACRSTATEFSTIATTASPIFVAAPAEKGNFLVDFLMGGVSAAVSKTAAAPIERIKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTMADEGVVSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKKGGGGRQFNGLIDVYKKTLATDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSLQDSFFASFGLGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFNQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIMLGKKYGSGGA 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01419 373 ProSiteProfiles Solute carrier (Solcar) repeat profile. 70 163 IPR018108 -
Trre16g01419 373 FunFam ADP,ATP carrier protein, mitochondrial 73 369 - -
Trre16g01419 373 ProSiteProfiles Solute carrier (Solcar) repeat profile. 175 268 IPR018108 -
Trre16g01419 373 Pfam Mitochondrial carrier protein 174 271 IPR018108 -
Trre16g01419 373 Pfam Mitochondrial carrier protein 277 363 IPR018108 -
Trre16g01419 373 Pfam Mitochondrial carrier protein 71 167 IPR018108 -
Trre16g01419 373 SUPERFAMILY Mitochondrial carrier 70 358 IPR023395 -
Trre16g01419 373 PRINTS Adenine nucleotide translocator signature 72 84 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trre16g01419 373 PRINTS Adenine nucleotide translocator signature 116 137 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trre16g01419 373 PRINTS Adenine nucleotide translocator signature 149 161 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trre16g01419 373 PRINTS Adenine nucleotide translocator signature 175 188 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trre16g01419 373 PRINTS Adenine nucleotide translocator signature 281 297 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trre16g01419 373 Gene3D Mitochondrial carrier domain 73 369 IPR023395 -
Trre16g01419 373 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 64 372 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trre16g01419 373 ProSiteProfiles Solute carrier (Solcar) repeat profile. 276 362 IPR018108 -
Trre16g01419 373 PRINTS Mitochondrial carrier protein signature 241 259 IPR002067 GO:0055085
Trre16g01419 373 PRINTS Mitochondrial carrier protein signature 285 307 IPR002067 GO:0055085
Trre16g01419 373 PRINTS Mitochondrial carrier protein signature 190 208 IPR002067 GO:0055085
Trre16g01419 373 PRINTS Mitochondrial carrier protein signature 88 102 IPR002067 GO:0055085
Trre16g01419 373 PRINTS Mitochondrial carrier protein signature 138 158 IPR002067 GO:0055085
Trre16g01419 373 PRINTS Mitochondrial carrier protein signature 75 88 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01419 Trre-Chr16 11131459 11133307 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01419 1 373 Antiporters AT5G13490 78.117 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01419 K05863 - gmx:100793257 619.387