Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01399 ATGACAGAGACCCTCTTGTTTTTGCTACTCATCCTCTCACTCTTCATCATAGCTTACATAATATTCTTCTTCACCACCACCACAACCACCGTTCTCCGCCTTCCACCAAGTCCACCATCCATCCCTCTAATAGGCCACCTCCACCTCCTCACTCCATCTCTCTACAAATCCTTCCACTCCATTTCCACCAAATATGGCCCTCTCCTCCACCTCCGTCTCGGCCCCTCTCGTGGCCTCCTCCTCGTCTCTTGTGCCTCCTCGGCCGCCTCCATCTTCAAAACAAATGACCTTGCCTTCTCTTCCCGACCGGAATTTGCATTCGCAGACAGGCTGCCTTATGGCAAGTCCGGCTTCGTCACCGCCCCTTATGGCCCTTACTGGCGTTTCATGAAGAAGTTATGCATGACAGAGCTGCTGAGTTGCCGACAATTGGAGCGGTCGACGAGCATAAGAAGAAATGAGACTGAGCGTTTGGTGAAAAGGGTGCTGGAGAATGCTGGTGTTGCTACTGCTGTTGATTTAGGTGCTGAGCTCATGAAGTTCACCAACAATGTTACTTGTAGAATGGCCATGAGCACCAGGTGTTCAGAGAAATGTGAGGATGCTGAGAAGATTAGGAAGTTAGTGAAGGAATCCTTTGAGCTAGCTGCCAAGTTGTGCTTTGGGGATGTGTTGGGTCCATTCAAAGAGTTGACTTTTTGGATTTATGGGAAACAGGCTATGGATGTTAGTAGAAGGGATATAATGGATATTCTGTTGGATGTTTATCATGATGCTCATGCTGAGTTCAAGATCACAAGGACTCATATCAAAGCCTTCTTTTTGGACCTATTCATTGGAGGCACTAATACCTCAGCAGAAGCTATGCAATGGGCAATGGCTGAGCTCCTTAACCATCCTGAAGCATTCCATAAGGTAAGAAATGAGATAGAGTCAGTCACACAAAATGTTAGGCTAGTTGAAGAATCAGATATCCCAAACATGCCATATTTACAAGCAGTGGTAAAAGAAACACTGAGACTTTATCCACCAGGACCAGTAACAACAAGAGAATGCAACCAAGACTGCAAAATTAATGGCTTTGATATACCAGCAAAAACAGCAGTAGCAATCAATTTATATGCTATAATGAGGGATCCAGAAATTTGGGAAGATGCAAATGAATTTCATCCTGAAAGGTTTTTGAAAGAAAAAGATGATCTAAGTAGTGATCATGATTATCAGAATGATGATAAAAGAATGGAGTTCAATTTTGTTCCATTTGGAGCAGGAAGAAGAGGGTGTCCAGGGACAGCACTAGCATATAACTTGATGAACACTGCTGTTGCTGCCATGGTTCAGTGCTTTGATTGGAAAATTGGTGAAGATGGAAAAGGAGATAAGGTTGATATGCAATCTGGTTCTAGTATGTCTTTAGGCATGGTTCATCCACTTATTTGTATTCCTGTTGTACATTTTAATCCATATGATGAATAA 1476 0.435 MTETLLFLLLILSLFIIAYIIFFFTTTTTTVLRLPPSPPSIPLIGHLHLLTPSLYKSFHSISTKYGPLLHLRLGPSRGLLLVSCASSAASIFKTNDLAFSSRPEFAFADRLPYGKSGFVTAPYGPYWRFMKKLCMTELLSCRQLERSTSIRRNETERLVKRVLENAGVATAVDLGAELMKFTNNVTCRMAMSTRCSEKCEDAEKIRKLVKESFELAAKLCFGDVLGPFKELTFWIYGKQAMDVSRRDIMDILLDVYHDAHAEFKITRTHIKAFFLDLFIGGTNTSAEAMQWAMAELLNHPEAFHKVRNEIESVTQNVRLVEESDIPNMPYLQAVVKETLRLYPPGPVTTRECNQDCKINGFDIPAKTAVAINLYAIMRDPEIWEDANEFHPERFLKEKDDLSSDHDYQNDDKRMEFNFVPFGAGRRGCPGTALAYNLMNTAVAAMVQCFDWKIGEDGKGDKVDMQSGSSMSLGMVHPLICIPVVHFNPYDE 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01399 491 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 9 472 - -
Trre16g01399 491 FunFam Cytochrome P450 family protein 244 480 - -
Trre16g01399 491 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01399 491 PRINTS P450 superfamily signature 333 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01399 491 PRINTS P450 superfamily signature 280 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01399 491 PRINTS P450 superfamily signature 428 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01399 491 Gene3D Cytochrome P450 28 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01399 491 SUPERFAMILY Cytochrome P450 31 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01399 491 CDD CYP93 66 482 - -
Trre16g01399 491 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01399 491 PRINTS E-class P450 group I signature 428 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01399 491 PRINTS E-class P450 group I signature 372 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01399 491 PRINTS E-class P450 group I signature 269 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01399 491 PRINTS E-class P450 group I signature 289 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01399 491 PRINTS E-class P450 group I signature 332 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01399 491 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Trre16g01399 491 Pfam Cytochrome P450 35 218 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01399 491 Pfam Cytochrome P450 244 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01399 Trre-Chr16 10958430 10960699 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01399 1 489 Cytochrome P450 AT2G42250 47.481 7.75e-166 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01399 K23814 - gmx:100790065 712.22