Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01374 ATGGATGAAAATGTGAAACGAGAATGGTCCATCAACGACTTCGAGATCGGAAAGCCACTCGGTAGAGGCAAGTTTGGCAGAGTCTACGTTGCCAGAGAAATCAAGAGTAAATATGTGATTGCATTGAAGGTTATATTTAAGGAACAGCTAGAAAAGTATAAAATTCACCATCAACTAAGGAGAGAAATGGAGATACAAATAAGTCTTAAACATCCAAACATCTTGCGTCTCTATGGTTGGTTTGATGATGCCGAACGTGTTTTCTTGATTCTTGAATATGCTCATAACGGTGAGCTATACAAGGAGCTTCGCAAAAGAGGTCATTTCTCAGAGAAACAAGCTGCAACGTACATTTTAAGCCTCACAAAGGCATTGGCATATTGTCACGAGAAGCATGTCATTCACAGGGACATCAAGCCTGAAAATTTGTTGCTTGACCATGAGGGTCGTCTTAAGATCGCAGACTTTGGTTGGTCTGTACAATCTAAAAGCAAAAGACAAACCATGTGTGGAACATTAGATTATCTAGCTCCTGAAATGGTAGAAAATAAAGCTCATGATCATGCAGTTGATAACTGGACTCTTGGTATCCTTTGTTATGAGTTCCTCTATGGTGTTCCTCCATTTGAGGCTGAGAGTCAAGAGGATACCTTCAAAAGGATAAGAAATATTGATCTGAACTTCCCTGCTGCCCCTCTTATTTCTAAAAATGCCAAAAATCTGATAACTCGGCTCCTGGTAAAAGATTCTTCAAAAAGGCTCTCACTTCAGAAGATAATGGAGCATCCTTGGATAAAAGAGAATGCAAATCATATGGGTGTTTGCCAGTAG 831 0.3971 MDENVKREWSINDFEIGKPLGRGKFGRVYVAREIKSKYVIALKVIFKEQLEKYKIHHQLRREMEIQISLKHPNILRLYGWFDDAERVFLILEYAHNGELYKELRKRGHFSEKQAATYILSLTKALAYCHEKHVIHRDIKPENLLLDHEGRLKIADFGWSVQSKSKRQTMCGTLDYLAPEMVENKAHDHAVDNWTLGILCYEFLYGVPPFEAESQEDTFKRIRNIDLNFPAAPLISKNAKNLITRLLVKDSSKRLSLQKIMEHPWIKENANHMGVCQ 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01374 276 Gene3D Phosphorylase Kinase; domain 1 2 97 - -
Trre16g01374 276 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Trre16g01374 276 PIRSF ILK 2 267 - -
Trre16g01374 276 ProSiteProfiles Protein kinase domain profile. 14 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g01374 276 Pfam Protein kinase domain 14 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g01374 276 CDD STKc_Aurora 13 266 - -
Trre16g01374 276 Gene3D Transferase(Phosphotransferase) domain 1 98 274 - -
Trre16g01374 276 FunFam Serine/threonine-protein kinase ark1 6 275 - -
Trre16g01374 276 FunFam Aurora kinase A 6 97 - -
Trre16g01374 276 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 6 275 IPR030616 GO:0004672
Trre16g01374 276 SUPERFAMILY Protein kinase-like (PK-like) 7 269 IPR011009 -
Trre16g01374 276 ProSitePatterns Protein kinases ATP-binding region signature. 20 47 IPR017441 GO:0005524
Trre16g01374 276 SMART serkin_6 14 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01374 Trre-Chr16 10762478 10765249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01374 3 268 CBL-interacting serine-threonine protein kinases AT2G26980 37.500 1.84e-60 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Trre16g01374 Pkinase 7.9e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01374 K08850 - gmx:100775802 495.738