Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01373 ATGCAGAAAGCTTGGTTCTATGAGGAGTATGGTCCAAAGGAAGTCCTTAAGCTAGGGGACTTACCTATTCCATCTCCTCTTCATAACCAACTACTTGTCCAAGTTCGTGCTGCTGCTTTGAATCCAATAGATTCAAAGAGGCGTTTGCGTCCTATTTTCCCTTCCAAGTTTCCTGTGGCTCCTGGATGTGACATGTCTGGAGTGGTGATAGGAAAAGGCATTAATGTCAAAAAATTTGACATTGGTGATGAAGTCTATGGCAACATACAAGATTTCAATAATACCGATGAAAAGCCAAAGCAACTTGGAACATTGGCACAGTTCATTGTTGTGGAAGAGAACTTAGTTGCAAGAAAACCAAAATGTCTTTCATTTGAGGAAGCTGCAAGTTTGCCATTGGCAGTTCAAACAGCAATTGAAGGATTCAAAACTGGTGATTTTAAGAAAGGTGAGACAATGTTTGTGGTTGGTGGAGCAGGTGGTGTTGGAACTTTGGTTCTTCAATTGGCCAAACTTTTGTTTGGAGCTTCCTATGTTGTGTCTTCATGTAGCACACCTAAAGTGGAATTTGTGAAGCAATTTGGTGCTGATGAAGTGGTGGATTATACTAAGACTAAATATGAAAACATTGAGGAGAAATTTGATTTTCTTTATGATACAGTTGGTGATTGCAAGAAATCTATTGTGGTAGCAAAGAAAGATGGAGCAATTGTGGACATAACATGGCCACCATCACATCCAAGAGCAGTTTATTCAAGTTTGAGTGTATCTGGTGAAATCTTGGAAAATCTGTGA 795 0.395 MQKAWFYEEYGPKEVLKLGDLPIPSPLHNQLLVQVRAAALNPIDSKRRLRPIFPSKFPVAPGCDMSGVVIGKGINVKKFDIGDEVYGNIQDFNNTDEKPKQLGTLAQFIVVEENLVARKPKCLSFEEAASLPLAVQTAIEGFKTGDFKKGETMFVVGGAGGVGTLVLQLAKLLFGASYVVSSCSTPKVEFVKQFGADEVVDYTKTKYENIEEKFDFLYDTVGDCKKSIVVAKKDGAIVDITWPPSHPRAVYSSLSVSGEILENL 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01373 264 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 2 264 IPR044626 GO:0016628
Trre16g01373 264 Pfam Zinc-binding dehydrogenase 161 242 IPR013149 -
Trre16g01373 264 Pfam Alcohol dehydrogenase GroES-like domain 29 88 IPR013154 -
Trre16g01373 264 SMART PKS_ER_names_mod 11 261 IPR020843 GO:0016491
Trre16g01373 264 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 123 248 IPR036291 -
Trre16g01373 264 Gene3D - 9 264 - -
Trre16g01373 264 SUPERFAMILY GroES-like 2 155 IPR011032 -
Trre16g01373 264 CDD MDR_like_2 3 249 - -
Trre16g01373 264 Gene3D - 142 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01373 Trre-Chr16 10757160 10758858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01373 2 221 Monolignol Biosynthesis Gene Families AT3G19450 25.203 1.44e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01373 K18980 - cave:132187488 413.69