Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01372 ATGGATGTTTTGTACACCCTGTTGACTTTCATAGCCTTATCTTTTCTAACAATTTTCCTAGCTATATGTTTCATCATGATGACAATCTTCAAAGGAAAATCCATAGGGGACCCAAAATATGCACCTGTGAAAGGCACAGTGTTCAATCAACTTTTCTACTTCAACAAACTCCATGATTACCATACTCAAATAGCTAAAACTCATCCAACTATGAGACTTCTTGCTCCAAATCAAAGTGAGTTGTATACCATAGATGTGAGAAATATTGAACATATATTGAAAACCAATTTTGATAAATATTCCAAAGGTAAGTATAATGAAGATATTATAAGTGATCTTTTTGGTGAGGGGATTTTTGCTGTTGATGGTGATAAGTGGAAGCAGCAAAGGAAAGTTGCTAGCTATGAATTTTCTACAAGAGTTCTTAGAGATTTTAGTTGTTCTGTTTTTAGAAAGCATGCTGCCAAATTGGTCAAAGTTATATCACAATTTTCTCATGAAGGAATTGCTTTTGATATGCAAGACTTACAAATGAGATGTGCTTTGGACTCAATATTCAAAGTTGGGTTTGGAACAGAATTGAATTGCTTAGAAGGATCAAGCAAAGAGGGAACTGAATTCATGAAGGCCTTTGATGAATCAAATGCTTTAATCTATTGGCGTTATGTTGATCCAATTTGGAGCATTAAGAGGTTTCTTAACATTGGTGGTGAGGCTAAGCTTAAACGCAATATCAAATTAATAGATGAATTTGTGAATAAAGTCATAAACACCAAAAAGGAACAGTTTGCACTTCACCAAGATTCTAATGTTAAAGAAGACATACTATCAAGGTTTTTGATGGAGAGTAAGAAGGGTCAAACAACTATAACTGATAAGTATTTGAGAGATATAATTCTTAACTTTATGATAGCTGGGAAAGACACCACTGCAAACACTCTTTCATGGTTCTTCTACATGTTATGCAAGAATCCTCTTGTAGAGGACAAGATTGTTCAAGAAATAAAAGATGTCACTTGTAGCCATGAAAGTGAACTCAACAACATAGATGAATTTGTTTCCAATTTAACAGATGTCATCATTGATAAAATGCATTATCTTCATGCAACATTGACAGAGACATTGAGATTGTACCCTGTAGTCCCTTTGGATGGAAGAACAGCAGATGCACCTGATGTTCTTCCTGATGGGCACAAAGTGAAAAAGGGTGACGGAGTATGGATTAACAACGGAATTTTTCAGCCTAAATCACCGTTCAAATTCGTAGCCTTCCATGCTGGACCTCGTATGTGCTTAGGGAAGGACTTTGCATATAGACAAATGAAAATAGTAGCAATGGCTATTCTTCATTTCTTCAAATTTAAATTGGCAAATGGAATAGAAAATGTGACTTATAAGGTCATGTTTACCCTTCACTTGGACAAGGGTCTCCCTCTCAATGCAATTTCAAGGTCATGTTTATTAAAGATATGA 1473 0.3503 MDVLYTLLTFIALSFLTIFLAICFIMMTIFKGKSIGDPKYAPVKGTVFNQLFYFNKLHDYHTQIAKTHPTMRLLAPNQSELYTIDVRNIEHILKTNFDKYSKGKYNEDIISDLFGEGIFAVDGDKWKQQRKVASYEFSTRVLRDFSCSVFRKHAAKLVKVISQFSHEGIAFDMQDLQMRCALDSIFKVGFGTELNCLEGSSKEGTEFMKAFDESNALIYWRYVDPIWSIKRFLNIGGEAKLKRNIKLIDEFVNKVINTKKEQFALHQDSNVKEDILSRFLMESKKGQTTITDKYLRDIILNFMIAGKDTTANTLSWFFYMLCKNPLVEDKIVQEIKDVTCSHESELNNIDEFVSNLTDVIIDKMHYLHATLTETLRLYPVVPLDGRTADAPDVLPDGHKVKKGDGVWINNGIFQPKSPFKFVAFHAGPRMCLGKDFAYRQMKIVAMAILHFFKFKLANGIENVTYKVMFTLHLDKGLPLNAISRSCLLKI 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01372 490 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 424 433 IPR017972 GO:0005506|GO:0016705
Trre16g01372 490 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01372 490 PRINTS E-class P450 group I signature 431 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01372 490 PRINTS E-class P450 group I signature 421 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01372 490 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01372 490 CDD CYP86A 69 477 - -
Trre16g01372 490 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01372 490 PRINTS P450 superfamily signature 422 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01372 490 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01372 490 PRINTS P450 superfamily signature 431 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01372 490 Pfam Cytochrome P450 416 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01372 490 Pfam Cytochrome P450 47 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01372 490 PANTHER CYTOCHROME P450 26 477 - -
Trre16g01372 490 SUPERFAMILY Cytochrome P450 38 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01372 490 Gene3D Cytochrome P450 33 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01372 Trre-Chr16 10744236 10747362 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01372 7 485 Cytochrome P450 AT2G45510 58.268 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01372 - - tpra:123900158 896.345