Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01371 ATGCCATTACTATCAATGGATATTTTATCAAATCCTTATCTTTTAACAGCTTTGTCTGCATCTTTAATTCTTTTGTTGGTTCAATTTCTATTGAGAAAATTGAACAAAAGCAATAATAGCATGAAGAAGAAGAAGTATCATCCTATTGCTGGAACTGTATTTAATCAGCTGATAAACTTCAACAGACTTCATCATTATATGACTGATCTTGCAAGAAAATACAAGACATACAGGTTGCTTAACTTGTTCAGAAATGAAGTATATACCGCAGATCCAAGTAATGTTGAGTATATACTCAAAACCAATTTTGCCAACTATGGAAAGGGGTTGTACAATTATATCAATTTGAATGATTTACTAGGAGATGGAATTTTCGCAGTTGATGGCGAGAAATGGCGGGAACAAAGGAAGATATCAAGTCATGTATTCTCCACCAAGATGTTAAGGGACTTCAGTACTATAATATTCAGAAAAAATGCAGCAAAAGTTGCAAATATAGTGTCTGAAGCTGCAAATTCTAATACTAAGATAGAAATCCAAGATCTTTTCATGAAATCAACACTGGATTCAATGTTCAGAGTTTCATTTGGAACTGAACTTGACAGCATGGGTGGAACAAGTGAAGAAAGGAAGAATTTCGCCATTGCTTTCGATTCTGCTAACGCTATAACGCTTTATCGTTATGTTGATGTCTTCTGGAAGATAAAGAGGTTTTTCAATCTTGGATCAGAGGCCACATTAAGAAAGAATACTCAAATTTTAGATGAATTTATCATTAAGCTAATAACCACTAAAATTGAAGAAATGAGGAATTCAAAGGGTGATTCTGTTAGAAAAAGTGGAGATATTCTCTCAAGGTTTCTACAAGTGAAGGATTTTGATACAACATACTTAAGAGATATAATTCTAAACTTTCTTATCGCCGGGAAAGATACGACGGCCGCAACACTTTCTTGGTTCATGTATATGCTATGCAAGTACCCTGCAGTACAAGAAAAAGCTGCAGAAGAAGTGAGAAAAGCAACAAACACAAAAACAATTAGTAGCTGCACTGAGTTTGTGTCGAGTGTAACAGATGAAGCTATCGAAAAGATGAATTATCTCAATGCAACACTCACAGAAACTCTCAGACTTTATCCTGCAGTTCCTGTGGATGCAAAGATTTGCTTTTCTGATGATACATTACCTGATGGATATAGTGTAAAAAAAGGAGACATGGTGGCTTACCAACCTTATGCAATGGGGAGAATGAAATTCATATGGGGTGATGATGCAGAGGAATTTAGACCAGAAAGATGGCTTGATGAAAATGGCATTTTTCAGCCAAAGAACCCTTTCAAGTTTACTGCTTTTCAGGCAGGTCCTCGAATATGCCTAGGAAAGGAGTTTGCTTATAGACAGATGAAGATATTCTCAGGTGTTTTATTAGGTTGTTTTCGTTTCAAATTGAATGATGAAAAGAAAAATGTGACTTATAAGACAATGATAACTCTTCATATTGATGGAGGTTTTGAAATCAAAGCCTCACACAGGGATTAG 1539 0.3522 MPLLSMDILSNPYLLTALSASLILLLVQFLLRKLNKSNNSMKKKKYHPIAGTVFNQLINFNRLHHYMTDLARKYKTYRLLNLFRNEVYTADPSNVEYILKTNFANYGKGLYNYINLNDLLGDGIFAVDGEKWREQRKISSHVFSTKMLRDFSTIIFRKNAAKVANIVSEAANSNTKIEIQDLFMKSTLDSMFRVSFGTELDSMGGTSEERKNFAIAFDSANAITLYRYVDVFWKIKRFFNLGSEATLRKNTQILDEFIIKLITTKIEEMRNSKGDSVRKSGDILSRFLQVKDFDTTYLRDIILNFLIAGKDTTAATLSWFMYMLCKYPAVQEKAAEEVRKATNTKTISSCTEFVSSVTDEAIEKMNYLNATLTETLRLYPAVPVDAKICFSDDTLPDGYSVKKGDMVAYQPYAMGRMKFIWGDDAEEFRPERWLDENGIFQPKNPFKFTAFQAGPRICLGKEFAYRQMKIFSGVLLGCFRFKLNDEKKNVTYKTMITLHIDGGFEIKASHRD 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01371 512 PANTHER CYTOCHROME P450 30 504 - -
Trre16g01371 512 SUPERFAMILY Cytochrome P450 45 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01371 512 CDD CYP86A 75 504 - -
Trre16g01371 512 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01371 512 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01371 512 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01371 512 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01371 512 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01371 512 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01371 512 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01371 512 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01371 512 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01371 512 Pfam Cytochrome P450 47 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01371 512 Gene3D Cytochrome P450 32 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01371 Trre-Chr16 10738424 10742473 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01371 6 511 Cytochrome P450 AT2G45510 51.751 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01371 - - gmx:100789049 787.334