Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01368 ATGGGCAGAATGCCTTACATTTGGGGGGATGATGCTCAAGAATTTATACCTGAAAGATGGCTCAAAGATGGAATCTTTCAACCTGAATCTTCATTCAAATTCATAGCTTTTCATGCTGGTCCACGTATCTGCTTAGGAAAGGACTTTGCATATAGGCAGATGAAAATAGTATCATTGGCACTTATTCGATTCTTTCGGTTTAAATTAGCAAATGAAACAAATGTTGTGACATATAGAACCATGTTCACTCTTCACATTGACAAAGGCCTCCCTCTTTATGCAATTCCAAGGTGTGATGTATCTTAA 306 0.3758 MGRMPYIWGDDAQEFIPERWLKDGIFQPESSFKFIAFHAGPRICLGKDFAYRQMKIVSLALIRFFRFKLANETNVVTYRTMFTLHIDKGLPLYAIPRCDVS 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01368 101 PANTHER CYTOCHROME P450 1 90 - -
Trre16g01368 101 SUPERFAMILY Cytochrome P450 1 97 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01368 101 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 37 46 IPR017972 GO:0005506|GO:0016705
Trre16g01368 101 Pfam Cytochrome P450 1 79 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01368 101 Gene3D Cytochrome P450 1 99 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01368 Trre-Chr16 10727148 10727946 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01368 1 97 Cytochrome P450 AT2G45510 76.289 1.59e-50 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01368 - - sly:101259987 176.792