Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01367 ATGAAGAAGAAGAAGTATCATCCTGTTGCTGGAACTGTGTTTAATCAGCTGATGAACTTCAACAGACTTCATCATTATATGACTGATCTTGCAAGAAAGTACAAGACATACAGGTTGCTTAATCCTTTCAGAAATGAAGTTTATACTGCTGAACCATGTAATGTTGAGTATATACTCAAAACCAATTTTGACAATTATGGAAAGGGGCTTTACAACTACCACAATTTGAAGGATTTACTTGGAGATGGAATTTTCACAGTTGATGGCGAGAAATGGCGTGAACAAAGGAAGATATCAAGTCATGAATTCTCCACCAAGATGTTAAGGGATTTCAGTACTTTAATATTCAGAAAAAATGCAGCAAAAGTTGCAAATATAGTGTCTGAAGCTGCAAATTCTAATACTAAGTTAGAAATCCAAGATATTTTCATGAAATCAACACTGGATTCAATTTTCAAAGTTGCATTTGGTACTGAACTTGACAGCATGTGTGGAACAAATGAAGAAGGGAAGAATTTTGCCAATGCTTTTGATTCTGCAAGTGCGTCAACGCTTTATCGTTATGTTGATGTCTTTTGGAAGATAAAGAAGTTTCTCAATATTGGATCAGAGGCAAAATTAAGAAACGACACTGAAATCTTAAATGAATTTGTTATTAAGCTAATCAACACTAGAATTCAGCAAATACAGAATTCAAAGGATGATTCTGTTAGCAAACGCAGCGATATTCTGTCGAGATTTCTGCAAGTGAAGGGATATGATACAAAATACTTAAGAGATATAATTCTAAACTTTGTTATTGCTGGGAAAGACACGACGGCCGCGACACTTTCTTGGTTCATGTATATGCTATGCAAGTATCCTGCAGTACAAGAAAAAGCTGCAAAAGAAGTGAGAGAAGCAACAAACACAAAAACAATTAGTAGCTGCACCGAGTTTGTTTCAAGTGTAACGGATGAAGCTATTGAAAAGATGACTTATCTTCATGCAGTTCTCACAGAAACTCTCAGACTTTATCCTGCAGTTCCTGTGGATGCGAAGATTTGCTTTTCTGATGATACATTACCAGATGGATATAGTGTAAGAAAAGGAGACATGGTGTCTTACCAACCTTATGCAATGGGGAGGATGAAATTCATATGGGGTGATGATGCTGAGGAATTTAGACCAGAAAGATGGCTTGATGAGAATGGCATTTTTCAGCCAGAAAGCCCTTTCAAGTTTACTGCTTTTCAGGCAGGTCCTCGAATATGTCTAGGAAAGGAGTTTGCTTATAGACAGATGAAGATATTCTCAGCTGTTTTATTAGGTTGTTTTCGTTTCAAATTGAATGATGAGAAGAAAAATGTGACTTATAAGACGATGATAAATCTTCATATTGATGGAGGTCTTGAAATCAAAGCCTTACACAGTGATTAG 1419 0.3608 MKKKKYHPVAGTVFNQLMNFNRLHHYMTDLARKYKTYRLLNPFRNEVYTAEPCNVEYILKTNFDNYGKGLYNYHNLKDLLGDGIFTVDGEKWREQRKISSHEFSTKMLRDFSTLIFRKNAAKVANIVSEAANSNTKLEIQDIFMKSTLDSIFKVAFGTELDSMCGTNEEGKNFANAFDSASASTLYRYVDVFWKIKKFLNIGSEAKLRNDTEILNEFVIKLINTRIQQIQNSKDDSVSKRSDILSRFLQVKGYDTKYLRDIILNFVIAGKDTTAATLSWFMYMLCKYPAVQEKAAKEVREATNTKTISSCTEFVSSVTDEAIEKMTYLHAVLTETLRLYPAVPVDAKICFSDDTLPDGYSVRKGDMVSYQPYAMGRMKFIWGDDAEEFRPERWLDENGIFQPESPFKFTAFQAGPRICLGKEFAYRQMKIFSAVLLGCFRFKLNDEKKNVTYKTMINLHIDGGLEIKALHSD 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01367 472 PANTHER CYTOCHROME P450 5 464 - -
Trre16g01367 472 CDD CYP86A 35 464 - -
Trre16g01367 472 PRINTS E-class P450 group I signature 277 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01367 472 PRINTS E-class P450 group I signature 257 274 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01367 472 PRINTS E-class P450 group I signature 329 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01367 472 PRINTS E-class P450 group I signature 408 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01367 472 PRINTS E-class P450 group I signature 418 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01367 472 PRINTS P450 superfamily signature 330 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01367 472 PRINTS P450 superfamily signature 268 285 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01367 472 PRINTS P450 superfamily signature 418 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01367 472 PRINTS P450 superfamily signature 409 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01367 472 Gene3D Cytochrome P450 2 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01367 472 SUPERFAMILY Cytochrome P450 5 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01367 472 Pfam Cytochrome P450 6 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01367 Trre-Chr16 10717235 10721539 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01367 4 469 Cytochrome P450 AT2G45510 54.873 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01367 - - gmx:100789049 822.772