Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01362 ATGGATATTTTATCAAATCCTTATCTTTTAACAGCTTTGTCTGCATCTTTAATTCTTTTGTTGGTTCAATTTCTATTGAGAAAATTGAACAAAAGCAATAATAGCATGAAGAAGAAGAAGTATCATCCTATTGCTGGAACTGTATTTAATCAGCTGATAAACTTCAACAGACTTCATCATTATATGACTGATCTTGCAAGAAAATACAAGACATACAGGTTGCTTAACTTGTTCAGAAATGAAGTATATACCGCAGATCCAAGTAATGTTGAGTATATACTCAAAACCAATTTTGCCAATTATGGAAAGGGGTTGTACAATTATATCAATTTGAATGATTTACTAGGAGATGGGATTTTCGCAGTTGATGGCGAGAAATGGCGGGAACAAAGGAAGATATCAAGTCATGTATTCTCCACCAAGATGTTAAGGGACTTCAGTACTATAATATTCAGAAAAAATGCAGCAAAAGTTGCAAATATAGTGTCTGAAGCTGCAAATTCTAATACTAAGATAGAAATCCAAGATCTTTTCATGAAATCAACACTGGATTCAATGTTCAGAGTTTCATTTGGAACTGAACTTGACAGCATGGGTGGAACAAGTGAAGAAAGGAAGAATTTCGCCATTGCTTTCGATTCTGCTAACGCTATAACGCTTTATCGTTATGTTGATGTCTTCTGGAAGATAAAGAGGTTTTTCAATCTTGGATCAGAGGCCACATTAAGAAAGAATACTCAAATTTTAGATGAATTTATCATTAAGCTAATAACCACTAAAATTGAAGAAATGAGGAATTCAAAGGGTGATTCTGTTAGAAAAAGTGGAGATATTCTCTCAAGGTTTCTACAAGTGAAGGATTTTGATACAACATACTTAAGAGATATAATTCTAAACTTTCTTATCGCCGGGAAAGATACGACGGCCGCAACACTTTCTTGGTTCATGTATATGCTATGCAAGTACCCTGCAGTACAAGAAAAAGCTGCAGAAGAAGTGAGAAAAGCAACAAACACAAAAACAATTAGTAGCTGCACTGAGTTTGTGTCGAGTGTAACAGATGAAGCTATCGAAAAGATGAATTATCTCAATGCAACACTCACAGAAACTCTCAGACTTTATCCTGCAGTTCCTGTGGATGCAAAGATTTGCTTTTCTGATGATACATTACCAGATGGATATAGTGTAAAAAAAGGAGACATGGTGGCTTACCAACCTTATGCAATGGGGAGAATGAAATTCATATGGGGTGATGATGCAGAGGAATTTAGACCAGAAAGATGGCTTGATGAAAATGGCATTTTTCAGCCAAAGAACCCTTTCAAGTTTACTGCTTTTCAGGCAGGTCCTCGAATATGCCTAGGAAAGGAGTTTGCTTATAGACAGATGAAGATATTCTCAGCTGTTTTATTAGGTTGTTTTCGTTTCAAATTGAATGATGAAAAGAAAAATGTGACTTATAAGACAATGATAACTCTTCATATTGATGGAGGTTTTGAAATCAAAGCCTCACACAGGGATTAG 1524 0.3524 MDILSNPYLLTALSASLILLLVQFLLRKLNKSNNSMKKKKYHPIAGTVFNQLINFNRLHHYMTDLARKYKTYRLLNLFRNEVYTADPSNVEYILKTNFANYGKGLYNYINLNDLLGDGIFAVDGEKWREQRKISSHVFSTKMLRDFSTIIFRKNAAKVANIVSEAANSNTKIEIQDLFMKSTLDSMFRVSFGTELDSMGGTSEERKNFAIAFDSANAITLYRYVDVFWKIKRFFNLGSEATLRKNTQILDEFIIKLITTKIEEMRNSKGDSVRKSGDILSRFLQVKDFDTTYLRDIILNFLIAGKDTTAATLSWFMYMLCKYPAVQEKAAEEVRKATNTKTISSCTEFVSSVTDEAIEKMNYLNATLTETLRLYPAVPVDAKICFSDDTLPDGYSVKKGDMVAYQPYAMGRMKFIWGDDAEEFRPERWLDENGIFQPKNPFKFTAFQAGPRICLGKEFAYRQMKIFSAVLLGCFRFKLNDEKKNVTYKTMITLHIDGGFEIKASHRD 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01362 507 Gene3D Cytochrome P450 27 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01362 507 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01362 507 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01362 507 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01362 507 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01362 507 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01362 507 SUPERFAMILY Cytochrome P450 40 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01362 507 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01362 507 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01362 507 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01362 507 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01362 507 PANTHER CYTOCHROME P450 26 499 - -
Trre16g01362 507 Pfam Cytochrome P450 42 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01362 507 CDD CYP86A 70 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01362 Trre-Chr16 10670988 10675018 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01362 1 506 Cytochrome P450 AT2G45510 51.751 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01362 - - gmx:100789049 788.875