Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01361 ATGATACCAATCTTTAAAGGAAAATCCATAGGAGACCCAAAATATGCACCTGTGAAAGGCACAGTGTTCAATCAACTTTTCTACTTCAACAAACTCCATGATTACCATGCTCAAATGGCCAAAACTCATTCAACTTTTAGGTTCCTTGCTCCAAATCATAGTGAGTTGTATACCATAGATGTTAGAAATATTGAACATGTATTGAAAAACAATTTTGATAAATACTCAAAAGGTAAATATAATCAAGATATCATAACTGATCTTTTTGGTGAGGGGATTTTTGCTGTTGATGATGATAAGTGGAAGCAGCAGAGGAAAGTTGCTAGCTATGAATTCTCCACAAGAGTTCTTAGAGATTTTAGTTGTTCTGTTTTTAGAAAGAATGCTGCCAAATTGATCAAAGTTATATCACAATTTTCTCATGAGGGTCTGATTTTTGATATGCAAGACTTACAAATGAGATGTGCTTTGGACTCAATATTCAAAGTTGGGTTTGGAACAGAATTGAATTGCTTAGAAGGATCAAGTAAAGAGGGAACTGAATTCATGAAGGCCTTTGATGAATCAAATGCTTTAATTTATTGGCGCTATGCTGATCCAATTTGGAGCATTAAGAGGTTTCTTAACATTGGTGGTGAGGCTAAGCTTAAGCGCAATGTCAAATTGATAGATGAATTTGTGAATGGAGTCATAAACACCAAAAAGGAACAGTTTGCACTTCACCAAGATTCTAATGTTAAAGAAGACATACTATCAAGGTTTTTGATGGAGAGTAAGAAGGGTCAAACAACTATAACTGATAAGTATTTGAGAGATATAATTCTTAACTTTATGATAGCTGGGAAAGACACCACTGCAAACACTCTTTCATGGTTCTTCTACATGTTATGCAAGAATCCTCTTGTAGAGGACAAGATTGTTCAAGAAATAAAAGATGTCACTTGTAGCCATGAAAGTGAACTCAACAACATAGATGAATTTGTTTCCAATTTAACAGATGTCATCATTGATAAAATGCATTATCTTCATGCAGCATTGACAGAGACATTGAGATTGTACCCTGTAGTCCCTGTGGATGGAAGAAATGCAGAAGCACCTGATTTTCTTCCTGATGGCCACAAACTAGAAAAGGGTGATGGAGTTTATTACTTGGCCTACGCTATGGGTCGAATGTCATCCATTTGGGGGGAAGATGCGGAGGAGTTTCGTCCTGAAAGATGGATTAACAATGGAATTTTCCAACCCGAATCGCCATTCAAATTTGTAGCATTCCATGCTGGACCTCGTATATGCTTAGGGAAGGACTTTGCATACAGACAAATGAAAATAGTAGCAATGGCTCTTCTTCATTTCTTCAAATTCAAATTGGCAAATGGAACACAAAATGTGACTTATAAGGTCATGTTTACCCTTCACTTGGACAAGGGTCTCCCTCTCAATGCAATTCCAAGGTCATGTTATTAA 1464 0.3641 MIPIFKGKSIGDPKYAPVKGTVFNQLFYFNKLHDYHAQMAKTHSTFRFLAPNHSELYTIDVRNIEHVLKNNFDKYSKGKYNQDIITDLFGEGIFAVDDDKWKQQRKVASYEFSTRVLRDFSCSVFRKNAAKLIKVISQFSHEGLIFDMQDLQMRCALDSIFKVGFGTELNCLEGSSKEGTEFMKAFDESNALIYWRYADPIWSIKRFLNIGGEAKLKRNVKLIDEFVNGVINTKKEQFALHQDSNVKEDILSRFLMESKKGQTTITDKYLRDIILNFMIAGKDTTANTLSWFFYMLCKNPLVEDKIVQEIKDVTCSHESELNNIDEFVSNLTDVIIDKMHYLHAALTETLRLYPVVPVDGRNAEAPDFLPDGHKLEKGDGVYYLAYAMGRMSSIWGEDAEEFRPERWINNGIFQPESPFKFVAFHAGPRICLGKDFAYRQMKIVAMALLHFFKFKLANGTQNVTYKVMFTLHLDKGLPLNAIPRSCY 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01361 487 SUPERFAMILY Cytochrome P450 13 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01361 487 PRINTS E-class P450 group I signature 343 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01361 487 PRINTS E-class P450 group I signature 269 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01361 487 PRINTS E-class P450 group I signature 289 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01361 487 PRINTS E-class P450 group I signature 431 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01361 487 PRINTS E-class P450 group I signature 421 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01361 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 424 433 IPR017972 GO:0005506|GO:0016705
Trre16g01361 487 PANTHER CYTOCHROME P450 5 477 - -
Trre16g01361 487 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01361 487 PRINTS P450 superfamily signature 280 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01361 487 PRINTS P450 superfamily signature 431 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01361 487 PRINTS P450 superfamily signature 422 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01361 487 CDD CYP86A 45 477 - -
Trre16g01361 487 Gene3D Cytochrome P450 8 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01361 487 Pfam Cytochrome P450 22 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01361 Trre-Chr16 10665701 10668045 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01361 1 485 Cytochrome P450 AT2G45510 62.887 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01361 - - tpra:123900158 946.036