Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01360 ATGGATGTTTTGTACACTCTGTTGACTTTCATAGCCTTATCTTTTCTAGCAGTTTTTCTAACCATATGTTTCATCATGATACCAATCTTTAAAGGAAAATCCATAGGAGACCCAAAATATGCACCTGTGAAAGGCACAGTGTTCAATCAACTTTTCTACTTCAACAAACTCCATGATTACCATGCTCAAATGGCCAAAACTCATTCAACTTTTAGGTTCCTTGCTCCAAATCATAGTGAGTTGTATACCATAGATGTTAGAAATATTGAACATGTATTGAAAAACAATTTTGATAAATACTCAAAAGGTAAATATAATCAAGATATCATAACTGATCTTTTTGGTGAGGGGATTTTTGCTGTTGATGATGATAAGTGGAAGCAGCAGAGGAAAGTTGCTAGCTATGAATTCTCCACAAGAGTTCTTAGAGATTTTAGTTGTTCTGTTTTTAGAAAGAATGCTGCCAAATTGATCAAAGTTATATCACAATTTTCTCATGAGGGTCTGATTTTTGATATGCAAGACTTACAAATGAGATGTGCTTTGGACTCAATATTCAAAGTTGGGTTTGGAACAGAATTGAATTGCTTAGAAGGATCAAGTAAAGAGGGAACTGAATTCATGAAGGCCTTTGATGAATCAAATGCTTTAATTTATTGGCGCTATGCTGATCCAATTTGGAGCATTAAGAGGTTTCTTAACATTGGTGGTGAGGCTAAGCTTAAGCGCAATGTCAAATTGATAGATGAATTTGTGAATGGAGTCATAAACACCAAAAAGGAACAGTTTGCACTTCACCAAGATTCTAATGTTAAAGAAGACATACTATCAAGGTTTTTGATGGAGAGTAAGAAGGGTCAAACAACTATAACTGATAAGTATTTGAGAGATATAATTCTTAACTTTATGATAGCTGGGAAAGACACCACTGCAAACACTCTTTCATGGTTCTTCTACATGTTATGCAAGAATCCTCTTGTAGAGGACAAGATTGTTCAAGAAATAAAAGATGTCACTTGTAGCCATGAAAGTGAACTCAACAACATAGATGAATTTGTTTCCAATTTAACAGATGTCATCATTGATAAAATGCATTATCTTCATGCAGCATTGACAGAGACATTGAGATTGTACCCTGTAGTCCCTGTGGATGGAAGAAATGCAGAAGCACCTGATTTTCTTCCTGATGGCCACAAACTAGAAAAGGGTGATGGAGTTTATTACTTGGCCTACGCTATGGGTCGAATGTCATCCATTTGGGGGGAAGATGCGGAGGAGTTTCGTCCTGAAAGATGGATTAACAATGGAATTTTCCAACCCGAATCGCCATTCAAATTTGTAGCATTCCATGCTGGACCTCGTATATGCTTAGGGAAGGACTTTGCATACAGACAAATGAAAATAGTAGCAATGGCTCTTCTTCATTTCTTCAAATTCAAATTGGCAAATGGAACACAAAATGTGACTTATAAGGTCATGTTTACCCTTCACTTGGACAAGGGTCTCCCTCTCAATGCAATTCCAAGGTCATGTTATTAA 1539 0.3626 MDVLYTLLTFIALSFLAVFLTICFIMIPIFKGKSIGDPKYAPVKGTVFNQLFYFNKLHDYHAQMAKTHSTFRFLAPNHSELYTIDVRNIEHVLKNNFDKYSKGKYNQDIITDLFGEGIFAVDDDKWKQQRKVASYEFSTRVLRDFSCSVFRKNAAKLIKVISQFSHEGLIFDMQDLQMRCALDSIFKVGFGTELNCLEGSSKEGTEFMKAFDESNALIYWRYADPIWSIKRFLNIGGEAKLKRNVKLIDEFVNGVINTKKEQFALHQDSNVKEDILSRFLMESKKGQTTITDKYLRDIILNFMIAGKDTTANTLSWFFYMLCKNPLVEDKIVQEIKDVTCSHESELNNIDEFVSNLTDVIIDKMHYLHAALTETLRLYPVVPVDGRNAEAPDFLPDGHKLEKGDGVYYLAYAMGRMSSIWGEDAEEFRPERWINNGIFQPESPFKFVAFHAGPRICLGKDFAYRQMKIVAMALLHFFKFKLANGTQNVTYKVMFTLHLDKGLPLNAIPRSCY 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01360 512 Pfam Cytochrome P450 47 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01360 512 Gene3D Cytochrome P450 33 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01360 512 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01360 512 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01360 512 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01360 512 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01360 512 CDD CYP86A 70 502 - -
Trre16g01360 512 PANTHER CYTOCHROME P450 25 502 - -
Trre16g01360 512 SUPERFAMILY Cytochrome P450 38 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01360 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Trre16g01360 512 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01360 512 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01360 512 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01360 512 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01360 512 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01360 Trre-Chr16 10665626 10668045 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01360 7 510 Cytochrome P450 AT2G45510 61.417 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01360 - - tpra:123900158 988.408