Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01359 ATGTGTTTCATCATGATGAAAATTTTCATAGGAAAATCCATAGGGAACCCAAAATATGCACCTGTTAAAGGCACAGCTTTTAACCTACTTTTCTACTTCAACAAAATGCATGATTACCAAACTCAAATGGCCAAAACTTATCCAACTTTGAGGCTTCTTGCTCCAAATTGTAGTAACTTGTACACAATAGATGTGAGAAATATTGAACATATATTGAAAACCAATTTTGATAAATACTCCAAAGGTATGCATAATCAAGATATTATGATTGATCTTTTTGGTGAGGGGATTTTTGTTGTTGATGGTGATAAGTGGAAGCTGCAGAGGAAAGTTGCTAGCTATGAATTTTCTACAAGAGTTCTTAGAGATTTTAGTTGTTCTGTTTTTAGAAACAATGCTGCCAAATTGGTCAAAGTTATATCACAATTTTCTCAAGAAGGACTTGTTTTTGATATGCAAGACTTACAAATGAGATGTGCTATGGATTCAATATTCAAAGTTGGGTTTGGAACAGATTTGAATTGCTTAGAAGGATCAAGCAAAGAGGGAGCTGAATTCATGAAGGCCTTTGATGAATCAAATGCTTTAATTTTTTGGCGTTTTGTTGATCCTATTTGGAGCATTAAGAGGTTTCTTAACATTGGTGGTGAGGCTAAGCTTAAGCGCAATATCAAATTGATGAATGAATTTGTCAATGGAGTAATTAAAACCAAAAAGGAAAAATTGGAACTTCAACAAGATTCTAATGTTAAAGAAGACATATTATCAAGGTTTTTGATGGAGAGTAAGAAGGGACAAACAACTATAACTGATAAGTACTTGAGGGATATAATTTTTAACTTTATGATAGCTGGGAAAGACACCACTGCAAACACTCTTTCATGGTTCTTCTACATGTTATGCAAGAACCCTCTTGTAGAGGACAAGATTGTGCAAGAAATAAAAGATGTCACTTGTAGCCATGAAAGTGAACTCAACAACATAGATGAGTTTGTTGCCAATTTAACAGATGTCATCCTTGATAAGATGCATTATCTTCATGCAGCATTGACAGAGACATTGAGATTGTACCCTGTAGTCCCTGTGAATGGAAGAATTGCAGATGCACCTGATGTTCTTCCTGATGGTCACAAAATAGAAAAGGGTGATGGAGTCTATTACTTGTCCTACGCTATGGGTCGAATGCCATCCATTTGGGGAGATGATGCTGAGGAATTTCGTCCAGAAAGATGGATTAACAATGGAATTTTCCAACCCGAATCGCCATTCAAATTTGTAGCATTCCATGGTGGACCTCGTGTGTGCTTAGGGAAGGATTTTGCATACAGACAAATGAAAATAGTAGCAATGGCTATTCTTCATTTCTTCACATTTAAATTGGCAAATGGAACACAAAATGTGACTTATAAGGTCATGTTTACGCTTCACTTGGACAAGGGTCTCCCTCTCAATGCATTTCCAAGACATATCATTGTGGCATTAAGAGGCACCATATCGATCACATCAAATTTTGCTCAATTCCAAATTGTTCTTCAAGCGTTTGGAATCGCCTCCTCCTATCCCCCTCATCTAGTTCGTGAAATTGTATGGAATAAAGGGGATCAGGATGCAATGGTAGTTCTCTAA 1626 0.3641 MCFIMMKIFIGKSIGNPKYAPVKGTAFNLLFYFNKMHDYQTQMAKTYPTLRLLAPNCSNLYTIDVRNIEHILKTNFDKYSKGMHNQDIMIDLFGEGIFVVDGDKWKLQRKVASYEFSTRVLRDFSCSVFRNNAAKLVKVISQFSQEGLVFDMQDLQMRCAMDSIFKVGFGTDLNCLEGSSKEGAEFMKAFDESNALIFWRFVDPIWSIKRFLNIGGEAKLKRNIKLMNEFVNGVIKTKKEKLELQQDSNVKEDILSRFLMESKKGQTTITDKYLRDIIFNFMIAGKDTTANTLSWFFYMLCKNPLVEDKIVQEIKDVTCSHESELNNIDEFVANLTDVILDKMHYLHAALTETLRLYPVVPVNGRIADAPDVLPDGHKIEKGDGVYYLSYAMGRMPSIWGDDAEEFRPERWINNGIFQPESPFKFVAFHGGPRVCLGKDFAYRQMKIVAMAILHFFTFKLANGTQNVTYKVMFTLHLDKGLPLNAFPRHIIVALRGTISITSNFAQFQIVLQAFGIASSYPPHLVREIVWNKGDQDAMVVL 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01359 541 Gene3D Cytochrome P450 11 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01359 541 CDD CYP86A 48 481 - -
Trre16g01359 541 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01359 541 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01359 541 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01359 541 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01359 541 PANTHER CYTOCHROME P450 7 481 - -
Trre16g01359 541 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Trre16g01359 541 SUPERFAMILY Cytochrome P450 16 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01359 541 Pfam Cytochrome P450 20 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01359 541 PRINTS E-class P450 group I signature 347 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01359 541 PRINTS E-class P450 group I signature 293 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01359 541 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01359 541 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre16g01359 541 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01359 Trre-Chr16 10655526 10658391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01359 1 488 Cytochrome P450 AT2G45510 60.896 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01359 - - tpra:123900158 892.108