Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01344 ATGCCATCCCGTCCGCCGCCACAACAACCACCTCTTCCAACCGCCCACCACCACCACCGTCAAATGATCCTCGGCAGCTGCATCGCTGCCGCCGTCTTCCTAACAGCTGCAATAATCTCTTTCGTAATCTTCCTCTACCGTAAACTATCACACAACCGAACAACACCGTTCGAACAAAGCCAAAGAAGATTCTCTTACTCCGTTCTCCGTCGTGCTTCAAATTCATTCTCACCTTCAACTCGTCTCGGTCATGGCGGTTTCGGTTCAGTTCACAAAGCTACTCTTCCGTCCGGCGAAACTGTCGCTTTGAAAGTAATGGATTCACCTGGTTCGATTCAAGGTGAGAGAGAGTTTCATAATGAACTTTCTCTTTGTTCAAATCTGAATTCACCGTTCATTCTTTCACTTCTCGGTTATTCTTCTGACCGGTCCGGGAAAAAGCTTGTTTTGGTTTATGAACTTATGGTGAACCGGAGTCTTCAAGATGCGCTATTGGACCGGCGGGCTAAAATTGGGGATTTTGGTCTTGCTAGAGTTAAGTGTTTGGAAGATTCTGGAATGGAAATGATGGTTGAAGAGATTCATGTGAAGAAAAAAAGAGAGGATCTTGTTGTTGGTGGTGGTGGTGTTGAGGATTGTAGTTCTGTTTCTGTTGTTGAAGAATTTGAGAGTGTTGTTACTAATACTACTGTTGGATTTGATGTTGATCGGTCGCCGGAGAGTTGTAATGTGAGGGTTTTGGATTCCGATGCTGCTTCGCCTGAGGTTTTGCTTTCGCCGGAGGTGGGGGTTGTGTCGCCGGAGATGAATGGGGTTGAGAAATTAAGTGTTGTGTCTGATGGTTGTTTTGATAAGTTTAGTATTGATAGTGGGAATCAGAGGAAGAGAGGTGGTGGTGGTTGTGGTGGTTCTGGGAGGGATTGGTGGTGGAAGCAAGAGAATAATGGGGGAGGATCTGAATCAGGGAGGGTGAAGGATTATGTTATGGAGTGGATTGGGAGTGAGATAAAGAAAGAGAGACCTAAGAGTAGTGAATGGGTTGGTTCTGGTTCATCGATTTGTTCCGGTGGTGATGCGGCTGCACCGTCGAAGGTGGAGGGTAAGAAGAAACAGAGGAAGAAATTGGAATGGTGGGCTTCACTTGATGAGGAGAAGGGTAAAGGGAAGAAGAATAGGAAACCAAGGGAATGGTGGAAGGAGGAGTTTTGTGAGGAGCTTTCAAAGAAGAGTAGGAAGAAAAAGAGAAGTCTTGATTGTCGCAGCGGTGGGGAATCGTGGTGGCAAAGAGACGAGGATGCAGGTAATGCGGCGGTGGAGAAGAAGAAAAAGAGAAAAAGTAAGAGTAGTAGAGGAAGTATTGATTGGTGGTTGGATGGATTAAGTGGTGAGCTTAGAAATAATGGAAGAAGAAATAGTCAAGATTGGGGTAATGGTGATGTACCAAAGAGTGGTGGAATAAGTAGCACACCAAGTATGAGAGGAACAGTTTGTTACATTGCTCCTGAATATGGTGGTGGTGGACAATTATCTGAGAAATGTGATGTGTATAGTTTTGGTGTTCTACTTTTGGTTTTGGTTGCTGGAAGAAGACCACTTCAAGTAACAGCATCACCAATTTCAGAATTTGAGAGAGCAAATCTAATTTCATGGGCTAGACAACTTGCTCATAATGGAAAACTATTGGATCTTGTTGATAGTTCTATTCATTCTTTGGATAAAGAACAAGCATTGCTTTGTATCACCATTGCATTGTTGTGTTTGCAGAGATCACCTGGGAAAAGACCTTCCATGAAAGAGATTGTTGGAATGCTTTCGGGTGAAGCTGACCCTCCTCATTTACCCTTTGAATTCTCACCTTCACCACCCTCTAATTTCCCTTTCAAATCAAGGAAAAAGGCTAGGTGA 1905 0.4425 MPSRPPPQQPPLPTAHHHHRQMILGSCIAAAVFLTAAIISFVIFLYRKLSHNRTTPFEQSQRRFSYSVLRRASNSFSPSTRLGHGGFGSVHKATLPSGETVALKVMDSPGSIQGEREFHNELSLCSNLNSPFILSLLGYSSDRSGKKLVLVYELMVNRSLQDALLDRRAKIGDFGLARVKCLEDSGMEMMVEEIHVKKKREDLVVGGGGVEDCSSVSVVEEFESVVTNTTVGFDVDRSPESCNVRVLDSDAASPEVLLSPEVGVVSPEMNGVEKLSVVSDGCFDKFSIDSGNQRKRGGGGCGGSGRDWWWKQENNGGGSESGRVKDYVMEWIGSEIKKERPKSSEWVGSGSSICSGGDAAAPSKVEGKKKQRKKLEWWASLDEEKGKGKKNRKPREWWKEEFCEELSKKSRKKKRSLDCRSGGESWWQRDEDAGNAAVEKKKKRKSKSSRGSIDWWLDGLSGELRNNGRRNSQDWGNGDVPKSGGISSTPSMRGTVCYIAPEYGGGGQLSEKCDVYSFGVLLLVLVAGRRPLQVTASPISEFERANLISWARQLAHNGKLLDLVDSSIHSLDKEQALLCITIALLCLQRSPGKRPSMKEIVGMLSGEADPPHLPFEFSPSPPSNFPFKSRKKAR 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01344 634 ProSiteProfiles Protein kinase domain profile. 76 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g01344 634 MobiDBLite consensus disorder prediction 612 634 - -
Trre16g01344 634 Gene3D Transferase(Phosphotransferase) domain 1 459 610 - -
Trre16g01344 634 MobiDBLite consensus disorder prediction 467 488 - -
Trre16g01344 634 MobiDBLite consensus disorder prediction 420 439 - -
Trre16g01344 634 SUPERFAMILY Protein kinase-like (PK-like) 50 623 IPR011009 -
Trre16g01344 634 Pfam Protein kinase domain 489 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g01344 634 Pfam Protein kinase domain 79 165 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre16g01344 634 MobiDBLite consensus disorder prediction 339 371 - -
Trre16g01344 634 ProSitePatterns Protein kinases ATP-binding region signature. 82 104 IPR017441 GO:0005524
Trre16g01344 634 PANTHER OS07G0586332 PROTEIN 168 634 IPR044576 -
Trre16g01344 634 Gene3D Phosphorylase Kinase; domain 1 41 154 - -
Trre16g01344 634 MobiDBLite consensus disorder prediction 420 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01344 Trre-Chr16 10557713 10559764 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01344 487 632 Receptor kinase-like Gene Family AT4G23320 36.242 1.26e-21 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Trre16g01344 Pkinase 1.1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01344 - - aip:107626015 771.541