Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01340 ATGGCAGAATCATCACCTTCCAAACAAAACTTAACCATTGACCCCTATGAATTCCTCAAAATCAAACTCAATCCAAATGGTTCCCTAACGAGAAACTACGTCGTCCCCACCGTGCCACCATCCTCCGATCCTAGCAACTCTCTTTCGCAACCCGCTCTCTCTAAAGACATTATCCTAAATGCCTCCGCAAAAACATCAATTCGTCTCTTTATTCCAAACCCTCCACCGCCTTCTTCCGCCGCTAAACTCCCCCTCATTCTCTACTTCCACGGAGGCGGTTTCATCCTCTACCATCCTTCCTCCCTCATCTTCCACCAACCCTGCTCCACATTTGCTGGTGAAATTCCCGTCGTTGTTGCCTCCGTTGATTATCGTCTCACGCCTGAGCATCGTCTTCCAGCCGCATATGACGACGCTGTTGAATCTCTTCTTTGGCTCAAATCACAAGCTCAAAATCCAAATGAATCTGATCCATGGATTAGAGACCATGTGGACTTTAATAAATGCTTCTTGATGGGAAATAGCGCGGGAGGTAACATCGCCTATTTTGCGGCTCTTCGTGCTCTAGATCTTGATCTCTCTCCTATTAAGATCCAAGGGCTATTATTAAACTCTCCGTTTTTTAGTGGGGTTCAAAGGACAGAATCTGAACTCCGTTTGATTAATGATCATATATTACCGTTACCTGCGGGTGATCTCATGTGGACCCTATCTTTGCCCGAGGGTGCGGATCGCGACCACGTGTATTGTAATCCAACGGTTTCAGATGCAGTATTCGGTGAGAAGATCGGACGGCTGCCGAGGACTTTTATTAATGGCTATGGTGGGGATCCATTGGTGGATAAGCAAAAGGAGGTAGTGAAGATTTTGGAAGCACATGGGGTGCACGTGGATTCCGATTTTTGTGAGGATGGGTATCATGCTGTGGAAATATTTGATCGTTCTAAGGCACAAGCTTTGGTTGATAATGTTAAGAAATTTATACTCTCTACCGTTGCTCCTCAATCCTCTATGTAA 1017 0.4572 MAESSPSKQNLTIDPYEFLKIKLNPNGSLTRNYVVPTVPPSSDPSNSLSQPALSKDIILNASAKTSIRLFIPNPPPPSSAAKLPLILYFHGGGFILYHPSSLIFHQPCSTFAGEIPVVVASVDYRLTPEHRLPAAYDDAVESLLWLKSQAQNPNESDPWIRDHVDFNKCFLMGNSAGGNIAYFAALRALDLDLSPIKIQGLLLNSPFFSGVQRTESELRLINDHILPLPAGDLMWTLSLPEGADRDHVYCNPTVSDAVFGEKIGRLPRTFINGYGGDPLVDKQKEVVKILEAHGVHVDSDFCEDGYHAVEIFDRSKAQALVDNVKKFILSTVAPQSSM 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01340 338 Gene3D alpha/beta hydrolase 16 335 IPR029058 -
Trre16g01340 338 Pfam alpha/beta hydrolase fold 86 309 IPR013094 GO:0016787
Trre16g01340 338 PANTHER ARYLACETAMIDE DEACETYLASE 31 309 - -
Trre16g01340 338 SUPERFAMILY alpha/beta-Hydrolases 51 332 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01340 Trre-Chr16 10530698 10531714 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01340 1 287 Carbohydrate Esterase AT1G68620 37.329 7.19e-54 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01340 - - psat:127075817 459.914