Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01339 ATGTCAAAATTTGATCCATACAGCCATTTTGGCTTGAGTTTAAACCCAGATGGAAGCCTCCACCGTGCCTACCAGACTCCCAAAACCGAACCAAACCCCGAGCCTTTACCGGGGATTTCCACGGTGTCCAAAGACATAACCATTAACAATGAGAAAAAACTATGGGCTCGAATATTCAGGCCAACAAAACTTCCATCAAATGACAACATGGTAGCGCGTCTACCGATATTGATCTACTTTCATAGTGGTGGTTGGGTAATTTTCAGCCCTGCTGATAATGACATCCATAAAAAATGTTCGAATTTCGCTTCTGACATCCCTAGTATTGTTATCTCTGTAGCCTATCGTAGGGCGCCAGAGAGCAGGCTTCCCGGGCAATACCAAGATGCCCGGGAAACTATTTTGTGGGTGAAGAAACAAGTGACAGATTCTAATGGCGAGAAGTGGTTGAAAGACTATGGTGATCCTTCGAGGTGTTATCTATATGGATGTGGTTGTGGTGGGAACATTGTGTTCAATACGGCTATGCAGATTGAGGACATGGACTTGGAGCCTCTAAAAATTGGTGGTCTTGTTATGAATCAACCTATGTTTTCTGGAGAGAAAAGAACGGCTTCAGAATTAAGGTTTGCGACGGACCAGACTCTGCCTTTACCAGTGTTGGACATGATGTGGGATTTGGCTTTGCCTAAGGAAACAGATCGTGACCATAGGTATTGCAATCCAATGGTGCAAGGGCCACATTTGGAAAATGTCAAGAAATTAAAGAGGTGTCTTATTATTGGGTATGGTGGAGACATCATGGTTGATCGACAACAAGAATTTGTGACCATGTTGGTCAAATGTGGGGTCCAGGTTGAAGCTCGTTTTGATCCTGTGGGGTTCCACAATATTGATATGGTGGACCCTGCTAGAGCTAGTGCAGTTATAAATATTGTAAGGGAGTTTATACTTTGA 957 0.4357 MSKFDPYSHFGLSLNPDGSLHRAYQTPKTEPNPEPLPGISTVSKDITINNEKKLWARIFRPTKLPSNDNMVARLPILIYFHSGGWVIFSPADNDIHKKCSNFASDIPSIVISVAYRRAPESRLPGQYQDARETILWVKKQVTDSNGEKWLKDYGDPSRCYLYGCGCGGNIVFNTAMQIEDMDLEPLKIGGLVMNQPMFSGEKRTASELRFATDQTLPLPVLDMMWDLALPKETDRDHRYCNPMVQGPHLENVKKLKRCLIIGYGGDIMVDRQQEFVTMLVKCGVQVEARFDPVGFHNIDMVDPARASAVINIVREFIL 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01339 318 PANTHER ARYLACETAMIDE DEACETYLASE 22 296 - -
Trre16g01339 318 Gene3D alpha/beta hydrolase 8 318 IPR029058 -
Trre16g01339 318 Pfam alpha/beta hydrolase fold 77 297 IPR013094 GO:0016787
Trre16g01339 318 SUPERFAMILY alpha/beta-Hydrolases 31 304 IPR029058 -
Trre16g01339 318 MobiDBLite consensus disorder prediction 21 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01339 Trre-Chr16 10526647 10528558 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01339 17 275 Carbohydrate Esterase AT1G68620 31.801 8.97e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g01339 - - gmx:100813863 498.049